Glycine max (soybean): 100816419
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Entry
100816419 CDS
T01710
Name
(RefSeq) pre-mRNA-processing factor 17
KO
K12816
pre-mRNA-processing factor 17
Organism
gmx
Glycine max (soybean)
Pathway
gmx03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
gmx00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100816419
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
gmx03041
]
100816419
Spliceosome [BR:
gmx03041
]
Complex C
Other components
Step II factors
100816419
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
WDR55
WD40_WDHD1_1st
Beta-prop_EML_2
EIF3I
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EML
Beta-prop_WDR75_1st
WD40_RFWD3
Beta-prop_RIG_2nd
Beta-prop_SPT8
ANAPC4_WD40
Beta-prop_TEP1_C
Beta-prop_EIPR1
WDR90_beta-prop_4th
Beta-prop_IFT122_1st
Beta-prop_DCAF4
WD_LRWD1
WD40_MABP1-WDR62_1st
Beta-prop_IFT140_1st
Beta-prop_NWD2_C
Beta-prop_Vps41
Beta-prop_SCAP
Motif
Other DBs
NCBI-GeneID:
100816419
NCBI-ProteinID:
XP_003536266
UniProt:
I1LCG9
LinkDB
All DBs
Position
10:complement(42547396..42551464)
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AA seq
580 aa
AA seq
DB search
MDLLHQYSDGDDPDSPSQNPSSPPRLLAGRSAAPKVDDTMLALTVTSSSSAALSRPIDPT
QHLVGFNPSYDQLWAPIQGPAHPFAKDGIAQGMRNHKLGFVEDASIEPFLFDEQYNTFHK
FGYAADPAANNFVGDLDALRDNNAVSVYNIPRHEHKKRRIEAKEKKKSDENTGDDDDNND
EEENQNPASEAWITKNKKSPWAGKKEGLQGELTEEQQKYAEEYAKKKGEEKSGFGGEKVE
VVKDKSTFHGKEEKDYQGRSWIAPPKDAKASNDHCYMPKRLIHTWSGHTKGVSAIRFFPK
YGHLILSAGMDTKIKIWDVFNSGKCMRTYMGHSKAVRDICFSNDGTKFLSAGYDKNIKYW
DTETGQVISTFATGKIPYVVKLNPDEDKQNVLLAGMSDKKIVQWDMNTGQITQEYDQHLG
AVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISLHPNANWLAAQ
SLDNQILIYSTREKFQLNKKKRFGGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKT
CKVYRTLKCHEGVCIGCEWHPLEQSKVATCGWDGMIKYWD
NT seq
1743 nt
NT seq
+upstream
nt +downstream
nt
atggatctccttcatcaatactcagacggcgacgatcccgactccccctctcaaaaccct
agctccccgccgcgcctcctcgccggccgctccgccgcccccaaggtcgacgacaccatg
ctggccctcaccgtgacctcctcctcctccgcggccctctctcggcccatcgacccgacc
cagcacctggtgggcttcaacccctcctacgaccagctctgggcccccatccagggcccg
gcccaccccttcgccaaggatggcatcgcccagggcatgcgcaaccacaagctcggcttc
gtcgaggacgcctccatcgaacctttcctcttcgacgagcagtacaacaccttccacaag
ttcggctacgccgccgaccccgccgccaacaacttcgtcggcgacctcgacgccctccgc
gacaacaacgccgtctccgtctacaacatcccccgccacgaacacaagaaacgccgcatt
gaggccaaggagaagaagaaatcagatgaaaacaccggcgacgacgatgacaacaacgac
gaggaggagaaccagaacccggcctcggaggcgtggataacgaagaacaagaagagccct
tgggcggggaagaaggaagggttgcaaggagaattgaccgaagagcagcagaagtacgcg
gaggagtatgcgaagaagaaaggggaagagaagagtggttttggaggggagaaagttgag
gttgttaaagataaaagcacttttcatgggaaagaggagaaggattaccaaggtaggtct
tggatcgcgcctcccaaggatgcaaaggcgagtaatgatcattgttatatgcccaagaga
ttgattcatacttggagtggacacaccaaaggggtttctgctattaggtttttccccaag
tatggccatttgattctctctgctggcatggataccaagattaagatttgggatgttttc
aactctggcaagtgtatgaggacttacatgggacactcgaaagccgttagggatatctgt
ttcagcaatgatgggaccaagtttttgagtgctgggtatgacaagaatattaagtattgg
gatacggagacagggcaggtgatatcgacgtttgccactgggaaaattccttacgttgtg
aagcttaatccagacgaggataagcagaatgttttgttggctggaatgagtgataagaag
attgttcagtgggatatgaataccgggcagataactcaggagtatgatcagcatttgggg
gctgtgaataccatcacctttgttgataacaacaggaggtttgttacttccagtgatgac
aagtccctcagggtctgggaattcggtattcccgtggttataaagtatattagtgagccc
cacatgcactccatgccttccatttcgcttcaccccaatgccaattggctcgccgcgcag
agcttggataaccagatacttatttatagcacaagggagaagttccaacttaacaagaag
aagagatttgggggacatattgtggctggatatgcgtgtcaggtcaatttttctccagat
ggacgatttgtcatgtcgggggatggtgaagggaagtgttggttctgggactggaagact
tgcaaggtctacagaactctcaagtgtcacgaaggtgtttgcattggttgcgagtggcat
cccttggaacagagcaaggtagccacgtgtggctgggatgggatgattaagtattgggac
tag
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