Glycine max (soybean): 100816455
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Entry
100816455 CDS
T01710
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 46 isoform X2
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
gmx
Glycine max (soybean)
Pathway
gmx03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
gmx00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100816455
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
gmx03041
]
100816455
03009 Ribosome biogenesis [BR:
gmx03009
]
100816455
Enzymes [BR:
gmx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
100816455
Spliceosome [BR:
gmx03041
]
Complex A
U1 snRNP components
U1 related factors
100816455
Complex B
100816455
Ribosome biogenesis [BR:
gmx03009
]
Eukaryotic type
Pre-60S particles
Helicases
100816455
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
WW
ERCC3_RAD25_C
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
100816455
NCBI-ProteinID:
XP_014627307
UniProt:
A0A0R4J5Z2
LinkDB
All DBs
Position
19:complement(559090..564163)
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AA seq
776 aa
AA seq
DB search
MAATATVSLMGPRYAPPDPTLPKPWRGLVDGKTGYLYFWNPETNVTQYERPSSSSASQSK
FSSVPSSSVQVQQSSQGSQRGRSPDFSDRYDRNGTGGSNDAGSRNNQSSKGGSYTSHDVS
NGTNVAGNGNSSVRGHGASDAGAGLSAESYRHRHEISVTGDNVPPPLASFGSTGFPSELL
REVQNAGFSAPTPIQAQSWPIALQGRDIVAIAKTGSGKTLGYLIPAFIHLKRSGNNSKMG
PTALVLSPTRELATQIQDEAMKFGKSSRISCACLYGGAPKGPQLRDIDRGADIVVATPGR
LNDILEMRRISLNQVSYLVLDEADRMLDMGFEPQIRKIVNEVPNRRQTLMFTATWPKEVR
KIAADLLVKPVQVNIGNVDELVANKSITQHVEVLPPMEKQRRLEHILRSQDQGSKIIIFC
STKKMCDQLARNLTRHFGAAAIHGDKSQAERDHVLSQFRTGRSPVLVATDVAARGLDIKD
IRVVVNYDFPTGVEDYVHRIGRTGRAGATGLAYTFFGDQDAKYASDLIKVLEGANQKVPP
ELRDMSSRSGGGMGRSRRWGSGGRGGHGDSGYGGRNNDSGYGGRGNDAGYGGRGSDSNYG
GRGTAASGRGGGRGFDHDSQRNDRGRSPDKGSSWSDRFKSVNRDRSRSPDRAALPQHSQG
GSFHKAMMERGGGGGDRNKSFNRDRSRSPSPHRQEKCPAVRDRSPVYSFHQSMMGRGQSS
PSSQRQRARSPHRNSPPSQGDGRYAGSHSSYNGEVEEGMIPEEEGMIGQDDPVNVN
NT seq
2331 nt
NT seq
+upstream
nt +downstream
nt
atggctgccacagcaactgtgtctttgatgggtccgaggtatgcaccaccagacccaaca
ctccctaaaccatggcggggtcttgtggatggcaagactgggtatctttacttttggaat
cctgagactaatgtcacccagtatgagaggccatcctcaagctcagcttcccagtcaaag
ttttcttcagtgcccagctcttctgtccaggttcaacaatcatctcaagggtcgcaacgt
ggtcgtagtcctgatttcagtgataggtatgatcgaaatggcactggtgggtcaaacgac
gctggatcccggaacaatcagagttccaaagggggaagttatacttctcatgatgtttca
aatggaacaaatgttgctggcaatggtaattcttctgtcagaggtcatggggcttcagat
gctggagctggactatctgctgagtcttatcgacatcggcatgaaatatctgtgactgga
gacaatgtgcctccaccgcttgcatcatttgggtcaactggctttccatctgagcttctg
agagaggtacaaaatgctgggttctcagccccaactccaattcaggcacagtcatggccc
attgctcttcaaggtagagatatagttgccattgctaaaacaggctcagggaaaaccttg
ggatatttaattccagcatttattcacctcaagcgctctggtaataactccaaaatgggc
cccactgcattggtactttcaccaacaagggagttggcaacacagatacaagatgaagcc
atgaagtttgggaaatcatctagaatttcatgtgcatgtttgtatggaggagcaccaaag
ggtcctcaactgagagacattgatcgtggagcagatattgtggtagccactcctggtcgc
ttgaatgatattcttgagatgagaagaattagtcttaatcaggtttcttacctggtgcta
gatgaggcagacaggatgctggatatgggttttgaacctcaaattaggaaaattgtgaat
gaggtgcccaatcgcaggcaaactctaatgtttactgcaacatggccaaaggaggttagg
aaaattgcagctgatctgctagtcaagcctgtccaggtgaacattgggaatgtagatgag
cttgttgctaacaagtctattactcagcatgttgaagtattgccaccaatggagaaacaa
agacggctggaacatattttgcggtcacaggatcaaggatcaaagataattattttttgt
tctaccaagaaaatgtgtgatcaacttgctcgtaatctgacacgtcatttcggagctgct
gctattcatggggataaatcccaggctgagagggatcatgtgttgagtcagtttcgaact
gggaggtctcctgtgctagtggccacagatgttgctgctcggggactggatatcaaggac
attagggtggttgtcaattatgacttccctacaggagtggaagattatgttcataggatt
ggaaggactggaagagctggagccactgggctagcttacactttctttggtgaccaggat
gctaaatatgcttcagatctcatcaaagtcttggaaggtgcaaaccagaaggtacctcca
gaacttcgtgatatgtcatcacggagtggtggtgggatgggtagatccagacgatggggt
tctgggggacgaggtggacatggtgattctggatatggtggaaggaataatgactctgga
tatggtggaagaggtaatgatgcaggatatggtggaagaggcagtgattctaattatgga
gggagggggactgctgcttctggcagaggtggaggccgtgggtttgaccatgactcccag
aggaatgataggggtcggagcccagacaagggatctagttggagtgatcgcttcaaaagc
gtcaaccgggatcgcagtcgtagtcctgacagggctgcactacctcaacattcccaaggt
ggcagctttcacaaggcaatgatggaacgtggtggtggtggtggtgatcgcaataagagc
tttaaccgggaccgaagccgcagtcctagccctcatagacaggagaagtgcccagcggtt
cgagatcgttccccagtttacagttttcatcaatcaatgatgggacgaggtcagtcatcc
ccttcatctcaacggcagcgtgcacgcagtcctcaccgaaactcacccccctcccagggt
gatggaagatatgctggatctcattcatcttacaatggagaagtggaggaagggatgatt
cccgaggaagaaggaatgattggtcaagatgatcccgtaaatgtcaattag
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