Glycine max (soybean): 100816476
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Entry
100816476 CDS
T01710
Name
(RefSeq) autophagy-related protein 13b
KO
K08331
autophagy-related protein 13
Organism
gmx
Glycine max (soybean)
Pathway
gmx04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
gmx00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
100816476
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gmx04131
]
100816476
03029 Mitochondrial biogenesis [BR:
gmx03029
]
100816476
Membrane trafficking [BR:
gmx04131
]
Autophagy
Autophagosome formation proteins
ULK complex
100816476
Atg1 complex
100816476
Mitochondrial biogenesis [BR:
gmx03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
100816476
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG13
Motif
Other DBs
NCBI-GeneID:
100816476
NCBI-ProteinID:
XP_040871523
LinkDB
All DBs
Position
5:37492611..37498553
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AA seq
618 aa
AA seq
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MASSHGNAHSDAAKMEQIITEFFAKSLHIILESRALYVSSRNSYGDQAVSSPCSSSSSSS
NVRPRDKWFNLALRECPAALENIDLWRQNNLECIVIDVILVQRPLVSVSFSPKRVIPRSS
SLKERCPFGWNTDQEELGVVGRSEKIVERWVVQYESRKTRDSNSGSRRSSNVSLHNLYKK
STLLLRSLYVTVRLLPAYKLFRELNSSGQIRDFTLAHRVSSFVEPFTRKEEAEMTKFGFT
PVDTSSGRLCLSVMYCSLASDVSSEPSTPMSPQVITDYVGSPLADPLRRFPSHLVAGLPS
HGSPSSLPSSRQRSWSFDHYRASPPSYLPSPTHSESLSSVYNASLPPHPTEMSMIQKKNT
NFEDYHHSASPSISNSGPFPCKPLLRSESAPVSIPIAEIANSPGYSNSHNVPPSPPLRGS
RGTAKIDRNTMQTGATAEKLFSLGKDESRKYSGVKISANSSPQISISRSSSRSYQNDFDD
TDFTCPFDVDDDDMTDPGSRAESLDHGHMTETLEAGGFFPIRKSQDAAVGVLVHMLKKAP
PLRQDFSTSQHLSQGSHPETRNHNTRGPNQILEPSRPVSIMSSGIIATRKTTADALEEFH
GYKEMKNLLLTRGSKHQI
NT seq
1857 nt
NT seq
+upstream
nt +downstream
nt
atggcatcgtctcatggtaatgcacactcggatgccgcgaagatggaacaaataatcacc
gagttcttcgcgaagagccttcacataatacttgaatcaagggcactctatgtgtcctcc
cgtaattcctatggtgatcaagctgtttcgtcaccgtgttcgtcgtcttcgtcttcatca
aatgtgcgaccgagggataagtggttcaatttggcgctccgggagtgccccgcggcgttg
gagaacattgacctctggcgccagaacaatctagagtgcatagtgattgatgtgattttg
gtgcagaggcctctggtgagtgtgagtttttctcccaaaagggttattcctaggagttct
tcactgaaggaaagatgcccttttggctggaacactgatcaggaagaattgggggttgtg
ggaaggagtgaaaagattgtggagaggtgggttgtgcagtatgagagtaggaagacaagg
gattctaattctggcagtaggaggtcaagcaatgtttctttgcataacttgtataagaaa
tcaactttgcttctgaggtctttgtatgtcactgttagacttttacctgcatataaactt
ttcagagagcttaattcgtctggacagattagggacttcacccttgctcaccgtgtgtct
tcttttgttgagcccttcacccggaaagaagaggctgaaatgacgaaattcgggttcacc
cctgtggatacttcttctggtaggctgtgtcttagtgtgatgtattgttccttagcctca
gatgtgagttctgaaccttcaactccaatgtccccacaagttataactgactatgttggg
agtccattggctgatccattaaggaggtttccttctcatctcgtggcaggattgccatca
catggctctccatcatcgttgccatcttcaaggcagcgtagttggagtttcgatcattat
agagcctcacctccttcttatttaccttcgcctactcattcagaatcactctcatcagtg
tataatgcaagtttgcctcctcatccaactgagatgtctatgattcagaagaagaataca
aactttgaggattatcatcactctgcatcaccttcaatctctaattctgggccatttcca
tgcaaaccacttttacgatctgaaagtgctccagtcagcatacctattgctgaaattgct
aattcccctggatactccaatagtcataatgtgcctccatctcctcccctaagaggttca
aggggcactgctaagattgatagaaacacaatgcaaacaggagcaacagctgagaagttg
ttttctcttggaaaagatgagtctcgaaaatattctggagtcaagatatctgctaacagc
tcgccccagatttcaatttccagaagctccagtaggtcttatcagaatgattttgatgat
actgattttacttgtccatttgatgtggatgatgatgatatgacagatccaggaagcaga
gctgaatctcttgatcatggtcatatgactgagacgcttgaagccggtggattctttccc
attagaaagtctcaagatgctgctgttggtgtgcttgtacatatgctgaaaaaagcacca
cctctacgtcaagatttctccacctcacaacacctgtcacaaggttcacaccctgaaacc
cggaaccataacactcgagggcccaatcagatccttgagccatcaaggcctgtgagcata
atgtcttctgggatcatagccactaggaaaacaacagctgatgcattggaagagttccat
ggttacaaagaaatgaaaaacttgctgcttacgcgaggtagtaagcaccagatatag
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