Glycine max (soybean): 100817379
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Entry
100817379 CDS
T01710
Name
(RefSeq) DNA polymerase delta catalytic subunit
KO
K02327
DNA polymerase delta subunit 1 [EC:
2.7.7.7
]
Organism
gmx
Glycine max (soybean)
Pathway
gmx03030
DNA replication
gmx03410
Base excision repair
gmx03420
Nucleotide excision repair
gmx03430
Mismatch repair
gmx03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
gmx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
100817379
03410 Base excision repair
100817379
03420 Nucleotide excision repair
100817379
03430 Mismatch repair
100817379
03440 Homologous recombination
100817379
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gmx03032
]
100817379
03400 DNA repair and recombination proteins [BR:
gmx03400
]
100817379
Enzymes [BR:
gmx01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
100817379
DNA replication proteins [BR:
gmx03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase delta complex
100817379
DNA repair and recombination proteins [BR:
gmx03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase delta complex
100817379
MMR (mismatch excision repair)
DNA polymerase delta complex
100817379
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_B
DNA_pol_B_exo1
zf-C4pol
POL3_N
REV3_N
DNA_pol_B_2
divDNApol
Motif
Other DBs
NCBI-GeneID:
100817379
NCBI-ProteinID:
XP_014631964
UniProt:
I1KBL4
LinkDB
All DBs
Position
6:complement(12641270..12655787)
Genome browser
AA seq
1085 aa
AA seq
DB search
MSNNASRKRAAPPSQPPPAKQAVMTQEEEFMDEDVFLNETLVSEDEESLILRDIEQRQAL
ANRLSKWTRPPLSADYVAGTRSVLYQQLEIDYVIGESHRELLPNSSGPAAIIRIFGVTKE
GHSVCCNVHGFEPYFYICCPPGMGPDDISHFHQTLEGRMREANRNSNVGKFIRRIEMVQR
RSIMYYQQSNSQPFLKVVVALPTMVASCRGILDRGIQLDGLGMKSFLTYESNVLFALRFM
IDCNIVGGNWIEIPAGKYKKTVKSLSYCQLEFDCLYSELVSHAPEGEYSKMAPFRILSFD
IECAGRKGHFPEPTQDPVIQIANLVTLQGEDQPFIRNVMTLKSCSPIVGVDVMSFETERE
VLLAWRDLIREVDPDIIIGYNICKFDLPYLIERAANLKIAEFPILGRIRNSRVRVKDTTF
SSRQYGTRESKEVTVEGRVQFDLLQVMQRDYKLSSYSLNSVSSHFLSEQKEDVHHSIISD
LQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIYNYVEMARVTGVPISFLLSRGQSIKVL
SQLLRKARQRNLVIPNAKQAGSEQGTFEGATVLEARAGFYEKPIATLDFASLYPSIMMAY
NLCYCTLVTPEDARKLNIPPESVNRTPSGETFVKSNLQKGILPEILEELLTARKRAKADL
KEAKDPLEKAVLDGRQLALKISANSVYGFTGATIGQLPCLEISSSVTSYGRQMIEHTKKL
VEDKFTTLNGYEHNAEVIYGDTDSVMVQFGVSAVEEAMNLGREAAEHISGTFTKPIKLEF
EKVYYPYLLISKKRYAGLFWTKPDNFDKMDTKGIETVRRDNCLLVKNLVNDCLHKILIDR
DIPGAVQYVKNAISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVELAERMRKRDAATA
PNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDPHYYLENQISKPILRIFEPILK
NASKELLHGSHTRSISISTPSNSGILRFAKKQLTCIGCKALLGKGYHTLCSHCKGREAEL
YCKTVSQVSELEMLFGRLWTQCQECQGSLHQDVLCTSRDCPIFYRRKKAQKDMGEAKLQL
DRWNF
NT seq
3258 nt
NT seq
+upstream
nt +downstream
nt
atgagcaacaacgcctcccggaagcgcgcggcgccgccgtcgcaacctccaccggcgaag
caagccgtaatgactcaggaagaagagttcatggacgaagacgtgttcttaaacgaaacc
ctcgtttccgaggacgaagaatccctcattctccgcgacatcgagcagcgccaggccctc
gccaaccgcctctccaagtggacccgtcctcctctctccgccgactacgtcgccggaact
cgtagcgtcctttatcagcagctggagattgattacgtgattggagagagtcacagggag
ttgctgccgaactcatctggacctgccgccattatcagaatatttggagttactaaggaa
ggacacagtgtttgttgcaatgttcatgggtttgaaccatatttctacatttgttgccct
cctggaatgggtccagatgatatctcccattttcatcaaactcttgagggaaggatgaga
gaagccaatagaaacagtaatgtgggaaaattcattcgccgtattgaaatggtgcagaga
aggagtattatgtactatcagcaatccaattcccaaccctttctcaaagttgtagttgca
ctcccaacaatggttgccagctgccgtggtattctggataggggtattcaacttgatggt
ttaggaatgaagagcttcttgacttatgaaagcaatgtactttttgcccttcgcttcatg
attgattgcaacatagttggtggaaattggattgaaattccagctggaaaatataagaaa
acagtgaaaagcttgtcttactgccagttagagtttgattgcttgtattccgaattggtt
agtcatgctccagaaggggaatattcaaagatggctccatttcgcatattgagttttgac
attgagtgtgctggtcgtaaaggtcattttcctgagcctacccaagatcctgtaatccag
attgctaatttggttactttacaaggagaagaccagccatttattcgtaatgtgatgacc
cttaaatcatgttctcctatcgttggtgttgatgtgatgtcatttgaaacagaaagagaa
gtcctgctagcttggagggatttaattcgtgaagtggacccggatattattattggatac
aacatctgcaaatttgacttgccatatcttattgagagagctgcgaacctgaagatagca
gaatttccaattctgggtcgtatcaggaacagtagagttcgagtaaaggatacaactttc
tcatcaaggcagtacgggaccagggaaagtaaagaagttacagtagaagggagagttcag
tttgatttactccaggttatgcaaagagactacaaattaagttcttattcactgaattct
gtgtcatcacacttcctttctgagcagaaagaggatgttcatcattcaattatatccgat
cttcagaatggaaacgcagaaactaggaggcgccttgctgtgtattgtttgaaggatgca
tatctccctcagcggcttttggataaattgatgttcatttacaattatgtggagatggct
cgagtaacaggtgtcccaatttcttttctactttccagaggccaaagcattaaagtactt
tctcaacttcttaggaaggcaagacagaggaatctggtcattcctaatgccaaacaggct
gggtctgaacaaggaacatttgaaggtgccactgtattggaggcaagggctggattttat
gaaaaaccaattgctactttagattttgcatccttgtatccatctattatgatggcctat
aatttatgttattgcactctggtgacccctgaagatgctcgcaagctcaacatccctcca
gagtctgtgaacagaactccatcgggtgaaacatttgttaaatcaaatttgcagaaggga
atacttcctgaaatacttgaagagctattaacagcccgtaaaagggcaaaagcagactta
aaggaggcaaaggatcccctggagaaggcagtgctagatggtagacagctggccctgaag
attagtgcaaattctgtttatgggtttacaggggccaccattggtcagttaccatgttta
gagatatcatcgagtgtaacaagctatggtcgacaaatgattgagcacacgaaaaaactt
gtggaagataaatttacgacacttaatggctatgaacacaatgccgaggtaatatatgga
gacacagattcagtcatggtacaatttggtgtttctgctgtagaagaggctatgaacttg
gggagagaagctgctgaacatattagtggaactttcacaaaacccatcaaactagaattt
gagaaggtttactatccatatctcctgattagcaagaagagatatgctggtttgttttgg
acaaaaccagacaactttgacaaaatggacactaaaggtattgaaacagttcgaagagac
aattgtttattggtcaaaaacctggtgaacgattgccttcacaaaatattgattgacagg
gacattcctggggcagtccagtatgtcaagaatgcaatttcagatcttctcatgaatcgt
atggacttatcacttctggttattacaaagggtttaacgaagacaggagatgattacgaa
gtaaaggcagctcatgttgaacttgctgaaaggatgcgcaagcgagatgctgccactgct
ccaaatgttggagacagagtaccatatgttattattaaagctgcaaaaggtgcaaaggca
tatgagagatcagaggatcctatctatgtgctagagaacaacatacccatagatcctcat
tactatcttgagaatcaaattagcaagccaattctgagaatttttgagccaattctgaag
aatgctagcaaagagcttctccatggaagtcatacaagatctatttctatttctacaccg
tcaaacagtggcatattgagatttgctaagaaacagcttacctgcattggttgtaaagct
ttacttggcaagggttatcacactctctgttcacattgcaaaggaagggaggctgagctg
tactgtaaaacagtatctcaagtgtctgagctggagatgctttttgggaggttgtggaca
cagtgtcaggagtgccaaggttcacttcatcaggatgttctctgcaccagtcgggattgt
ccaattttctatcgacgaaaaaaggcacagaaagatatgggtgaagcaaagttgcaattg
gacagatggaacttctaa
DBGET
integrated database retrieval system
