Glycine max (soybean): 100817661
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Entry
100817661 CDS
T01710
Name
(RefSeq) protein VACUOLELESS1
KO
K20180
vacuolar protein sorting-associated protein 16
Organism
gmx
Glycine max (soybean)
Pathway
gmx04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
gmx00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
100817661
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gmx04131
]
100817661
Membrane trafficking [BR:
gmx04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
100817661
Hops complex
100817661
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps16_N
Vps16_C
Motif
Other DBs
NCBI-GeneID:
100817661
NCBI-ProteinID:
XP_003551927
UniProt:
A0A0R0EYW9
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Position
18:12684169..12692632
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AA seq
843 aa
AA seq
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MANVSVAAEWQLLYNRYYRKPELYPMPWKHVDLARTKVAAAPFGGPIAVIRDDSKIVQLH
AESALRKLRLFSSSGRPLADAVWRHPGGRLVGMSWTDDQTLLCVVQDGTVYRYDVHANLI
EPNLSLGKECFEDNVADCVFWGNGLVCITEANQLFCIADFRNPSAVKLADPEIEEMPHCM
AVIEPQYTVSGNVEVLLGVDDAVVLAVEEDGVQRLGEGVLRGPLQKMVVSRDGKWLASFT
HDGRLLVTTSDLTGVIIERECESALPPQQIAWCGMDAVLLYWDDMLLMMSPEGEPVHYLF
DEPIILIPECDGVRILSNTRMEFLQRVPDSTVSIFTIGSTSPAALLYDALDHFDRRSAKA
DENLRLIRSSLPEAVEACVDAAGHEFDLSRQQTLLRAASYGQAFCSNFQRDRIQEMCKIL
RVLNAVRSPEIGVPLSIQQYKLLTPSVLIGRLINAHQHLLALKISEYLGMNQEVVIMHWA
CSKITASLAIPDATLLEILLDKLKLCKGISYAAVAAHADKNGRRKLSALLVEHEPRSSKQ
VPLLLSIGEEDIALMKATECGDTDLVYLVLFHIWQKRQPLEFFGTIQARPLARDLFITYA
RFYKHEFLKDFFLSTGQLQDVAFLLWKESWELGKNPMASKGSPLHGPRIKLIEKAHGLFA
ETKEHTFESKAAEEHAKLLRIQHELEVTTKQAIFVDSSISDTIRTCIVLGNHRAAMKVKT
EFKVSEKRWYWLKVFALATIKDWVALEKFSKEKKPPIGYRPFVEACIEADEKGEAIKYIP
KLADPRERAESYARIGMAKEAADAASQAKDGELLGRLKLTFAQNAAASSIFDTLRDRLSF
QGA
NT seq
2532 nt
NT seq
+upstream
nt +downstream
nt
atggcgaacgtgtccgtcgcggcggagtggcagctcctctacaaccgctactaccgcaag
ccggagctctaccctatgccgtggaagcacgtggacctcgcccgcaccaaggtcgccgcc
gcgcccttcggcggccccatcgccgtcatccgcgacgactccaagatcgtgcagctccac
gctgagtccgccctccgtaagctccgcctcttctcctcctcgggccgccccctcgccgac
gccgtctggcgccaccccggcggccgcctcgtcggaatgtcctggaccgacgaccagact
ctcctatgcgtcgtccaggacggcaccgtctaccgctatgacgtccacgccaacctaatc
gaaccgaacctctccctcgggaaagagtgctttgaagataacgttgcggattgcgtgttt
tgggggaacggtttggtttgcatcaccgaggcgaatcagttgttctgtattgccgatttc
aggaaccctagcgcggtgaagctcgcggatcccgagatcgaggaaatgccgcattgtatg
gccgtgattgagccgcagtacacggtatccgggaatgttgaggttttgctcggcgtggat
gatgctgtggtgcttgctgtggaggaagatggcgtgcagaggctcggggagggagtgctg
cgggggccgctgcagaagatggtggtttcgcgcgacggcaagtggctcgcgtcgtttact
cacgacgggaggctcttggtgacgacttcggacttgactggagttatcatcgagagggag
tgtgagtcagctcttcctccgcagcagattgcttggtgtggaatggatgctgtgctgctg
tactgggatgatatgcttttaatgatgagtcctgagggagagccagttcactaccttttt
gatgaaccaataattcttatacctgagtgtgatggagtaaggatattgtccaatactaga
atggaatttctacagcgggtgcctgattccaccgtttcaatcttcacaattggaagtaca
tcacctgctgctttactatatgatgccttggatcattttgatagacgaagtgccaaggca
gatgaaaatttgagattgataagatcatcccttcctgaggctgttgaagcatgtgttgat
gctgcaggtcatgaatttgatctttcacgccagcaaactctcctaagggcagccagttat
gggcaagccttttgtagcaattttcaacgtgatcgtatccaagagatgtgtaaaattctg
cgggtcttgaatgcagtgcgcagccctgagattggcgttcctcttagtattcagcaatac
aagttgcttacaccatctgttctgattggtcgcctgattaatgctcaccaacatctgctt
gcactgaaaatatcagaatatcttggaatgaatcaagaggtggtgataatgcactgggca
tgttcaaagataactgcttcactggcaattcctgatgcgactcttctggagattctgctg
gataagttaaaactgtgcaaaggcatatcctatgcagcagttgctgctcatgcagacaaa
aatggccgacgaaagttatctgccttgcttgttgaacatgagcctcgttcatcgaaacag
gttcctctcctgttaagcattggagaagaagatatagccttgatgaaggcaaccgaatgt
ggtgatacagatcttgtttaccttgtactttttcatatttggcaaaagaggcagccattg
gagttctttggcaccatacaggccagaccattggcacgggacttatttataacttatgca
cggttttataaacatgaatttttgaaggacttcttcttatcaactgggcaactgcaagat
gtggcatttcttctgtggaaagaatcctgggaacttgggaaaaaccccatggcaagcaaa
ggatctccacttcatggtcctcgaataaaacttattgagaaggcacatggtctttttgct
gaaaccaaggagcatacctttgaatcaaaggcagctgaagagcatgcaaaacttttaaga
attcagcacgaacttgaagtgactacaaagcaggctatttttgtggattctagtataagt
gatacaatccgtacttgtattgtcttgggaaatcatcgagcagcaatgaaagtgaaaaca
gaatttaaggtgtctgagaagagatggtattggcttaaagtttttgccttagcaacaatc
aaggattgggttgccttagagaaattttcaaaggagaagaaacctccaattggttataga
ccatttgttgaggcatgcattgaagcggatgaaaagggagaagctattaaatatatccca
aaacttgcagaccctcgagaaagagctgagtcatatgctcgaattggtatggccaaggaa
gctgccgatgctgcttcacaggcaaaagatggtgaattacttggtcggttgaaattgaca
tttgcacaaaatgcagcagcttcatcaatatttgatactcttcgagatcggttgtctttc
caaggtgcttaa
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