Glycine max (soybean): 100817775
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Entry
100817775 CDS
T01710
Name
(RefSeq) uncharacterized protein LOC100817775 isoform X2
KO
K10756
replication factor C subunit 3/5
Organism
gmx
Glycine max (soybean)
Pathway
gmx03030
DNA replication
gmx03410
Base excision repair
gmx03420
Nucleotide excision repair
gmx03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
gmx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
100817775
03410 Base excision repair
100817775
03420 Nucleotide excision repair
100817775
03430 Mismatch repair
100817775
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gmx03032
]
100817775
03036 Chromosome and associated proteins [BR:
gmx03036
]
100817775
03400 DNA repair and recombination proteins [BR:
gmx03400
]
100817775
DNA replication proteins [BR:
gmx03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
100817775
DNA Replication Termination Factors
ELG1-RFC complex
100817775
Chromosome and associated proteins [BR:
gmx03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
100817775
DNA repair and recombination proteins [BR:
gmx03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
100817775
Check point factors
HRAD17(Rad24)-RFC complex
100817775
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RCF1-5-like_lid
RFC_C
AAA_16
TIP49
AAA_5
Arg_tRNA_synt_N
Motif
Other DBs
NCBI-GeneID:
100817775
NCBI-ProteinID:
XP_025984434
LinkDB
All DBs
Position
1:complement(52070588..52075650)
Genome browser
AA seq
703 aa
AA seq
DB search
MDQSSPYYNRFPQTPSSTKKGRSGYEPSDTESERQEIPRHERERRNFTLEETKDFTLMNK
SPMALHRRHPSRFENEVSSASTASTASAPRRRHHSKSPYKLRVAEANVAVAVAGVASSSP
IIGLNTRRNISPLSRPDIGRTVSPFREQRIEKPHYKRSVTAPRLRIQESNNGGRTNEKVN
RQREASPFKAPSVGEINEMIAQVKLSQDPTSDYSSVLESTDSIHPGDLFFSRECNAFQAK
NSSLPRRIEQREHFSPRPPVNTTRVPSERKGKNADIKMNMNILSRSTTVLSTSATSRKGS
GTGKPSSVTSEGSGKTTESMRKFTANRKKNQKDTWFSCMRTGNCRTTRKSPERRPIDESS
FIERAVVVESLPQFWADKHEPASLNGFICNRQEAQLLKELVSQGSCPHILLQGPSGSGKR
ELAMALLREIYGDACCNLSHDLRHFPIQDQRLKKVSVPITSSSHHMELDVNSESNAKYAL
MGLIKEISNIYAVAPEVSNINFKSDFKVIVLYDVHKAVDNIRHIIKWIIDRYSDICKLVL
CCEDDADIIEHVKNRFKVIQVDAPQNHEIIEVLIQIAKNEEIDLSMNFAAKIATKSKQNL
RKAIMALEACKAHNYPFSAEQPIPVGWEEIVIEVAAEILADPSFSRLLSIRGKFQMLLLD
FVHPKLILQKLVGHLLKRIEVSLRRELYYWHAYYVSFFLHNLS
NT seq
2112 nt
NT seq
+upstream
nt +downstream
nt
atggatcagtcatcaccttattataaccgatttcctcagactccaagctcaaccaaaaag
ggaagaagtggttatgaaccatcagacacagagtcagagcggcaagagattccacggcat
gaacgagaaagaagaaacttcactttagaagaaacaaaagattttactctaatgaacaaa
agccccatggcactacacaggaggcacccttcaaggtttgaaaacgaagtctcatcagct
tcaacagcttcaacagcttcagctccacgaagaagacaccatagtaaatcaccctataag
ctgcgcgtagcagaagcaaatgttgctgttgctgttgctggtgttgcatcatcatcaccc
ataataggtttgaatacaaggagaaatatcagtcccttgtcgagacctgacattggaaga
accgtgtctcctttcagggagcaaagaattgagaagccacactacaagagatcagtgact
gctccaagattgaggattcaagagagcaacaacggagggagaaccaatgaaaaggttaat
agacaaagagaagcttctcctttcaaagctccttcggttggagaaatcaacgagatgata
gcacaggtgaagctatctcaagatcccaccagtgattattcgtcagtgcttgaaagcact
gattccattcatccgggtgaccttttcttttctcgcgaatgcaatgcctttcaagcgaag
aattcttcgttgccaagacgcatcgaacaacgtgagcatttcagtccaaggccaccggtg
aacaccacgagagtcccatccgaaagaaaaggaaagaatgctgacattaagatgaatatg
aatatcttgtctcgatcaaccacggttttaagtacttcggctacgagcagaaagggcagt
ggcactgggaagccaagtagtgtaacaagcgaaggtagtggaaagacaactgaaagcatg
aggaaattcacagccaacagaaaaaagaatcagaaagatacatggttttcttgcatgaga
acaggtaactgtagaaccactagaaaatcgcctgaacgtcgaccaattgatgaatcttct
ttcatagagagggcagtggtagtcgaaagcctcccacaattctgggcagataagcacgaa
cctgcttcacttaatggcttcatttgcaacagacaagaagctcaacttctcaaggaattg
gtgtctcagggctcttgtcctcatattttgcttcaaggaccctctggctctgggaaaaga
gaactagcaatggctcttcttcgagaaatatatggggatgcatgttgtaacctgtctcat
gatttaagacatttccctattcaggaccaaaggcttaagaaagtatctgttccaataaca
tccagttctcatcacatggagctcgatgtaaattcagaatcaaatgctaaatatgcttta
atgggattaatcaaagaaattagcaatatatatgcagttgcccccgaagtcagcaatatt
aatttcaagtcagattttaaagttatagttctttatgacgtccacaaagcagtagataat
atccggcacattatcaaatggatcatagaccgctattcggatatttgcaaattagtgctc
tgctgtgaagatgatgcagacattattgaacatgtgaaaaatcgattcaaagttatccaa
gttgatgctcctcaaaatcacgaaattattgaggttcttattcagatagcaaagaatgag
gaaattgatctatccatgaattttgctgcaaaaattgctacaaaatctaagcagaacctc
agaaaagcaatcatggctcttgaagcatgcaaagcacacaactatccattttctgcagaa
caaccaattccggttggatgggaggagattgtaatagaagttgccgcagagatcctagct
gatccatcattttcacgcttactctcaatacgagggaaatttcaaatgcttctcttggat
tttgtccacccgaaattgattctccagaaactcgtgggacatctcctaaaaagaattgag
gtcagcttaagaagggagctttactactggcatgcttattatgtgagtttcttcctccat
aatttgtcttaa
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