Glycine max (soybean): 100817821
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Entry
100817821 CDS
T01710
Name
(RefSeq) ubiquitin receptor RAD23d
KO
K10839
UV excision repair protein RAD23
Organism
gmx
Glycine max (soybean)
Pathway
gmx03420
Nucleotide excision repair
gmx04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
gmx00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
100817821
09124 Replication and repair
03420 Nucleotide excision repair
100817821
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
gmx03051
]
100817821
03400 DNA repair and recombination proteins [BR:
gmx03400
]
100817821
Proteasome [BR:
gmx03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
100817821
DNA repair and recombination proteins [BR:
gmx03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
100817821
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GFIT
Motif
Pfam:
UBA
XPC-binding
ubiquitin
UBA_7
Rad60-SLD
UBA_RAD5A
Dsc3_N
Rad60-SLD_2
UBA_3
TECR_N
SIP1
ScsC_N
Motif
Other DBs
NCBI-GeneID:
100817821
NCBI-ProteinID:
XP_003551850
UniProt:
I1N5C6
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Position
18:57754398..57760847
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AA seq
375 aa
AA seq
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MKINVKTLKGTHFVLQVNPQDTVAVVKKNIETAQGADVYPAAQQMLIHQGKVLNDATTLE
ENKVVENNFVVIMLSKNKVSSGASSAPSNLGTQPQSSLPPTSSTSQPPASAVGQGESNSE
QSPVITPPTIAVPSIYDHAASNLMAGSNLETTIQQILEMGGGNWDRDTVTGALHAAFNNP
ERAIEYLYSGIPERADVPAAVRSLITGQAENSSIQSTQPAVPTGGPNTNPLNLFPQGLPN
MSAIDNRGDLDSLRNREEFQALRETMRENPQILQPMIQELGQQNPQLMQIIQDHQEDILD
LMNEPEGDENLQSQLDSMISGTVTITPEENEAIQRLEAMGFHRDIVVEAFFACNKNEDLA
ANYLLDHPDEFMPTD
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
atgaagattaacgtcaagactctcaaggggactcactttgtccttcaagtgaaccctcaa
gacacggttgctgttgtgaagaagaatatagagacagcgcaaggtgctgatgtttaccct
gctgcgcaacaaatgcttattcatcaggggaaggtgcttaacgatgccacaacccttgag
gaaaataaagttgttgagaataattttgtggtgatcatgttaagcaagaataaggtatca
agtggagcctcatctgcgccctcaaacctgggaacccaacctcaaagttctttgcctcct
acttcatcaacatctcaacctcctgcatcggctgtaggacagggagaatccaattctgag
cagagtccagttataactcctcccactattgctgtgcccagtatctatgatcatgcagca
tcaaatcttatggcaggaagtaatttagaaacaactattcaacaaattctagaaatgggg
ggaggaaattgggaccgggatactgttaccggtgctcttcatgctgcatttaacaatcct
gaaagagctattgaatatctctattctggaattcctgaacgagctgatgtaccagcagct
gtcagatccctgattactgggcaagcagaaaactcatcaatccagtctacccaaccagct
gtacctactggtggaccgaacaccaacccactcaacctgtttccccagggccttcccaat
atgagtgcaattgataatagaggagacttggattccttgcgaaacagagaagagttccaa
gcattaagagagacgatgcgagaaaacccccaaattttgcagcctatgattcaggaactg
ggacaacaaaatcctcagctaatgcagatcatccaagatcatcaagaggacatacttgac
cttatgaatgaacctgaaggggacgagaatttacagagtcagttggattccatgatttct
gggactgtcactatcacccctgaagagaatgaggccattcaacggcttgaagctatggga
tttcatcgagatattgtggtggaggcgttctttgcatgcaataaaaacgaggatctagca
gccaactatctattggatcacccggatgaatttatgcctacggactag
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