Glycine max (soybean): 100818056
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Entry
100818056 CDS
T01710
Name
(RefSeq) vacuolar sorting protein 18
KO
K20181
vacuolar protein sorting-associated protein 18
Organism
gmx
Glycine max (soybean)
Pathway
gmx04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
gmx00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
100818056
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gmx04131
]
100818056
Membrane trafficking [BR:
gmx04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
100818056
Hops complex
100818056
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pep3_Vps18
Clathrin
RPN1_RPN2_N
zf-RING_11
zf-RING_Vps41
Nup54_57_C
zf_RING_Vps8_fungal
zf_RING_Vps8
zf-RING_UBOX
Motif
Other DBs
NCBI-GeneID:
100818056
NCBI-ProteinID:
XP_014620526
UniProt:
K7LW07
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All DBs
Position
12:complement(37622721..37636192)
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AA seq
981 aa
AA seq
DB search
MDQGRQVFTVDLLERYAAKGRGVITCMAAGNDVIVIGTSRGWVVRHDFGVGNSNEIDLSV
GRPGDQSIHRVFVDPGGSHCIATVVGPGGAETFYTHAKWTKPRILSKLKGLVVNAVAWNK
QQITEVSTKEVILGTENGQLHELAVDEKDKKEKYIKFLFELTELQEAFMGLQMETASMIN
GTRYYVMAVTPTRLYSFTGSYLDRTVHFMELPGDIANSELHFFIKQRRAVHFAWLSGAGM
YHGGLNFGGQQSSSSGNENFIENKALLDYSKLSEGAEVVKPSSMALSEFHFLLLLGNKVK
VVNRISEKIIEELQFDQTSDSASKGIIGLCSDATAGLFYAYDQNSIFQVSINDEGQDMWK
VYLDMNEYAAALANCRDPFQRDQVYLVQAEAAFSFKDYLRAASFYAKINYILSFEEVTLK
FISIGEQDALRTFVLRKLDNLEKSDKCQITMISTWTTELYLDKINRLLLEDDFASENNNL
EYQSIIKEFCTFLSDNKDVLDETTTMKLLESYGRVEELVYFASLKGQYEIVVHHYIQQGE
AKKALEVLQKPSVPIDLQYKFAPDLVALDAYETVESWMTTKNLNPRKLIPAMMRYSSEPH
AKNETHEVIKYLEYCVHRLHNENPGIHNLLLSLYAKQEDDSSLLRFLQSKFGKGPENGPE
FFYDPKYALRLCLKEKRMRACVHIYSMMSMHEEAVALALQIDSELAMAEADKVEDDEDLR
KKLWLMIAKHVVEQEKGTKRENIRKAIAFLKETDGLLKIEDILPFFPDFALIDDFKEAIC
SSLEDYNKQIEQLKEEMNDATHGADNIRNDISALAQRCTIIDRDEECGVCQRKILTAGRE
FGTGRGYTLVGQMAPFYIFPCGHAFHAECLIVHVTRCTVETHAEYILDLQKQLSLMGSEA
RRESNGTLSPEESIPSMTTIDKLRSQLDDAIASECPFCGDLMIRKIFLPFINPEEEQHVL
SWEIKPSSGSQRNSISLPASA
NT seq
2946 nt
NT seq
+upstream
nt +downstream
nt
atggatcaagggaggcaggtattcacagtggaccttcttgaacgatatgctgcaaaaggg
cgtggagttatcacttgcatggctgctggaaatgatgtcattgtgattggaaccagcaga
ggatgggtcgtcaggcatgattttggggttggcaattcaaatgagattgatctctccgtg
ggtcgtcctggggaccagtcaatccatagggtttttgttgatcctggagggagtcactgt
attgccactgtagttggtcctggaggagctgaaactttctatactcatgccaaatggacc
aagccacgaattttgagcaagctgaaaggtcttgttgtaaatgccgttgcatggaacaag
cagcagataactgaagtttccacaaaggaagtcattcttgggacagaaaatggtcaactt
catgagttggctgtggatgagaaggacaagaaagagaagtatatcaagtttctctttgaa
ttaacagaacttcaagaagcttttatgggtttgcagatggaaacagctagcatgataaat
gggactagatactatgtgatggctgttactcctactcggctttactctttcactggaagt
tatttagatcgtacggtgcattttatggaacttcctggtgacatagcaaacagtgagttg
cattttttcatcaagcaacgaagagctgtacattttgcatggctttctggtgctggtatg
taccatggtggcttaaattttggaggacaacaaagctcttcaagtggaaatgaaaatttt
attgagaataaggctcttttggactactccaaattgtctgaaggagctgaagtagttaaa
ccaagttcaatggctttgtctgaattccatttcttgttgcttttagggaataaggtcaag
gttgtaaacagaattagcgagaagatcattgaggaacttcagtttgatcaaacttctgat
tcagcctctaagggtattataggattgtgtagtgatgccacggctggtttgttttatgca
tatgatcaaaactccatctttcaggtgtctatcaatgatgaaggccaagatatgtggaaa
gtatatcttgacatgaatgaatatgctgctgctttagcaaactgccgtgacccttttcaa
agggaccaagtatatttagtccaggctgaagctgcgttttcttttaaagattatttaaga
gctgcttctttctatgccaaaatcaattatattttatcatttgaagaggtcactttgaag
ttcattagtattggtgaacaggatgctttgagaactttcgtactgcggaagcttgataat
ttagaaaagagtgacaaatgtcaaataacaatgatatccacctggacaactgaattatac
ttggataagataaatcgactgctcttggaagatgactttgcatcagagaataacaattta
gagtaccaatcaattattaaagagttttgtacttttctcagtgacaacaaagatgtattg
gatgaaacgactacaatgaaacttttagaaagttatggaagggttgaagaattggtatat
tttgctagcttaaaagggcagtatgagattgtagttcaccattacattcagcaaggagaa
gcaaaaaaagcattggaagtgcttcagaaaccttctgtgcctatagatcttcagtataag
tttgctccagaccttgttgcccttgatgcatatgaaactgttgaatcgtggatgactaca
aagaatctgaacccaaggaaactgattcctgcaatgatgcgttattcaagtgaaccacat
gcaaagaatgagacacacgaagtcattaaatatcttgaatattgtgttcatcgattacat
aatgaaaatcctggaattcataacctgctactttctttatatgcaaaacaggaagatgat
agttcacttctacgtttcctacaaagcaaatttgggaaaggaccagaaaatggtcctgag
ttcttctacgatcctaaatacgccttgcgtctttgcctcaaggaaaaacgaatgcgtgca
tgtgttcatatatacagtatgatgtcaatgcatgaagaagcagttgctcttgccttacag
attgattcagagcttgctatggccgaagctgataaggttgaagatgatgaggatttgaga
aagaagctttggctcatgattgccaagcatgttgttgaacaagaaaaaggaactaagagg
gaaaacataaggaaggcaattgcatttcttaaagaaactgatggcctgctaaagatagag
gatatattaccattctttccagattttgccctgattgacgacttcaaggaggctatctgc
tcatcattggaggattacaataagcaaattgaacagctgaaggaagagatgaatgatgca
acccatggtgctgacaacatcagaaatgatatcagtgcacttgctcaaagatgcactatt
attgatcgagatgaggagtgtggggtttgtcaacgaaaaattttaacagctggcagggaa
tttggcacgggccgtggctatacattagtaggccaaatggcacctttttatatctttcca
tgtggacatgccttccatgcagaatgcctgattgtccatgtgactcgctgtacagttgag
acccatgctgagtatatactggatctgcagaagcaactttctttgatgggcagtgaagca
aggagagaatccaatggtaccctttctccagaggagtccattcctagcatgaccactata
gacaagctccgatcacaactggatgatgctatagctagtgaatgcccattttgtggtgac
ctgatgatccgtaagatttttttgcctttcatcaatcctgaggaagagcagcatgtgcta
tcatgggagataaaaccaagctctggaagccagagaaatagtatctcgttacctgcatct
gcatga
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