KEGG   Glycine max (soybean): 100818056
Entry
100818056         CDS       T01710                                 
Name
(RefSeq) vacuolar sorting protein 18
  KO
K20181  vacuolar protein sorting-associated protein 18
Organism
gmx  Glycine max (soybean)
Pathway
gmx04148  Efferocytosis
Brite
KEGG Orthology (KO) [BR:gmx00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04148 Efferocytosis
    100818056
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:gmx04131]
    100818056
Membrane trafficking [BR:gmx04131]
 Endosome - Lysosome transport
  Tethering complex
   CORVET complex
    100818056
   Hops complex
    100818056
SSDB
Motif
Pfam: Pep3_Vps18 Clathrin RPN1_RPN2_N zf-RING_11 zf-RING_Vps41 Nup54_57_C zf_RING_Vps8_fungal zf_RING_Vps8 zf-RING_UBOX
Other DBs
NCBI-GeneID: 100818056
NCBI-ProteinID: XP_014620526
UniProt: K7LW07
LinkDB
Position
12:complement(37622721..37636192)
AA seq 981 aa
MDQGRQVFTVDLLERYAAKGRGVITCMAAGNDVIVIGTSRGWVVRHDFGVGNSNEIDLSV
GRPGDQSIHRVFVDPGGSHCIATVVGPGGAETFYTHAKWTKPRILSKLKGLVVNAVAWNK
QQITEVSTKEVILGTENGQLHELAVDEKDKKEKYIKFLFELTELQEAFMGLQMETASMIN
GTRYYVMAVTPTRLYSFTGSYLDRTVHFMELPGDIANSELHFFIKQRRAVHFAWLSGAGM
YHGGLNFGGQQSSSSGNENFIENKALLDYSKLSEGAEVVKPSSMALSEFHFLLLLGNKVK
VVNRISEKIIEELQFDQTSDSASKGIIGLCSDATAGLFYAYDQNSIFQVSINDEGQDMWK
VYLDMNEYAAALANCRDPFQRDQVYLVQAEAAFSFKDYLRAASFYAKINYILSFEEVTLK
FISIGEQDALRTFVLRKLDNLEKSDKCQITMISTWTTELYLDKINRLLLEDDFASENNNL
EYQSIIKEFCTFLSDNKDVLDETTTMKLLESYGRVEELVYFASLKGQYEIVVHHYIQQGE
AKKALEVLQKPSVPIDLQYKFAPDLVALDAYETVESWMTTKNLNPRKLIPAMMRYSSEPH
AKNETHEVIKYLEYCVHRLHNENPGIHNLLLSLYAKQEDDSSLLRFLQSKFGKGPENGPE
FFYDPKYALRLCLKEKRMRACVHIYSMMSMHEEAVALALQIDSELAMAEADKVEDDEDLR
KKLWLMIAKHVVEQEKGTKRENIRKAIAFLKETDGLLKIEDILPFFPDFALIDDFKEAIC
SSLEDYNKQIEQLKEEMNDATHGADNIRNDISALAQRCTIIDRDEECGVCQRKILTAGRE
FGTGRGYTLVGQMAPFYIFPCGHAFHAECLIVHVTRCTVETHAEYILDLQKQLSLMGSEA
RRESNGTLSPEESIPSMTTIDKLRSQLDDAIASECPFCGDLMIRKIFLPFINPEEEQHVL
SWEIKPSSGSQRNSISLPASA
NT seq 2946 nt   +upstreamnt  +downstreamnt
atggatcaagggaggcaggtattcacagtggaccttcttgaacgatatgctgcaaaaggg
cgtggagttatcacttgcatggctgctggaaatgatgtcattgtgattggaaccagcaga
ggatgggtcgtcaggcatgattttggggttggcaattcaaatgagattgatctctccgtg
ggtcgtcctggggaccagtcaatccatagggtttttgttgatcctggagggagtcactgt
attgccactgtagttggtcctggaggagctgaaactttctatactcatgccaaatggacc
aagccacgaattttgagcaagctgaaaggtcttgttgtaaatgccgttgcatggaacaag
cagcagataactgaagtttccacaaaggaagtcattcttgggacagaaaatggtcaactt
catgagttggctgtggatgagaaggacaagaaagagaagtatatcaagtttctctttgaa
ttaacagaacttcaagaagcttttatgggtttgcagatggaaacagctagcatgataaat
gggactagatactatgtgatggctgttactcctactcggctttactctttcactggaagt
tatttagatcgtacggtgcattttatggaacttcctggtgacatagcaaacagtgagttg
cattttttcatcaagcaacgaagagctgtacattttgcatggctttctggtgctggtatg
taccatggtggcttaaattttggaggacaacaaagctcttcaagtggaaatgaaaatttt
attgagaataaggctcttttggactactccaaattgtctgaaggagctgaagtagttaaa
ccaagttcaatggctttgtctgaattccatttcttgttgcttttagggaataaggtcaag
gttgtaaacagaattagcgagaagatcattgaggaacttcagtttgatcaaacttctgat
tcagcctctaagggtattataggattgtgtagtgatgccacggctggtttgttttatgca
tatgatcaaaactccatctttcaggtgtctatcaatgatgaaggccaagatatgtggaaa
gtatatcttgacatgaatgaatatgctgctgctttagcaaactgccgtgacccttttcaa
agggaccaagtatatttagtccaggctgaagctgcgttttcttttaaagattatttaaga
gctgcttctttctatgccaaaatcaattatattttatcatttgaagaggtcactttgaag
ttcattagtattggtgaacaggatgctttgagaactttcgtactgcggaagcttgataat
ttagaaaagagtgacaaatgtcaaataacaatgatatccacctggacaactgaattatac
ttggataagataaatcgactgctcttggaagatgactttgcatcagagaataacaattta
gagtaccaatcaattattaaagagttttgtacttttctcagtgacaacaaagatgtattg
gatgaaacgactacaatgaaacttttagaaagttatggaagggttgaagaattggtatat
tttgctagcttaaaagggcagtatgagattgtagttcaccattacattcagcaaggagaa
gcaaaaaaagcattggaagtgcttcagaaaccttctgtgcctatagatcttcagtataag
tttgctccagaccttgttgcccttgatgcatatgaaactgttgaatcgtggatgactaca
aagaatctgaacccaaggaaactgattcctgcaatgatgcgttattcaagtgaaccacat
gcaaagaatgagacacacgaagtcattaaatatcttgaatattgtgttcatcgattacat
aatgaaaatcctggaattcataacctgctactttctttatatgcaaaacaggaagatgat
agttcacttctacgtttcctacaaagcaaatttgggaaaggaccagaaaatggtcctgag
ttcttctacgatcctaaatacgccttgcgtctttgcctcaaggaaaaacgaatgcgtgca
tgtgttcatatatacagtatgatgtcaatgcatgaagaagcagttgctcttgccttacag
attgattcagagcttgctatggccgaagctgataaggttgaagatgatgaggatttgaga
aagaagctttggctcatgattgccaagcatgttgttgaacaagaaaaaggaactaagagg
gaaaacataaggaaggcaattgcatttcttaaagaaactgatggcctgctaaagatagag
gatatattaccattctttccagattttgccctgattgacgacttcaaggaggctatctgc
tcatcattggaggattacaataagcaaattgaacagctgaaggaagagatgaatgatgca
acccatggtgctgacaacatcagaaatgatatcagtgcacttgctcaaagatgcactatt
attgatcgagatgaggagtgtggggtttgtcaacgaaaaattttaacagctggcagggaa
tttggcacgggccgtggctatacattagtaggccaaatggcacctttttatatctttcca
tgtggacatgccttccatgcagaatgcctgattgtccatgtgactcgctgtacagttgag
acccatgctgagtatatactggatctgcagaagcaactttctttgatgggcagtgaagca
aggagagaatccaatggtaccctttctccagaggagtccattcctagcatgaccactata
gacaagctccgatcacaactggatgatgctatagctagtgaatgcccattttgtggtgac
ctgatgatccgtaagatttttttgcctttcatcaatcctgaggaagagcagcatgtgcta
tcatgggagataaaaccaagctctggaagccagagaaatagtatctcgttacctgcatct
gcatga

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