Glycine max (soybean): 100818104
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Entry
100818104 CDS
T01710
Name
(RefSeq) autophagy-related protein 13a
KO
K08331
autophagy-related protein 13
Organism
gmx
Glycine max (soybean)
Pathway
gmx04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
gmx00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
100818104
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gmx04131
]
100818104
03029 Mitochondrial biogenesis [BR:
gmx03029
]
100818104
Membrane trafficking [BR:
gmx04131
]
Autophagy
Autophagosome formation proteins
ULK complex
100818104
Atg1 complex
100818104
Mitochondrial biogenesis [BR:
gmx03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
100818104
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG13
Motif
Other DBs
NCBI-GeneID:
100818104
NCBI-ProteinID:
XP_003544848
UniProt:
K7M7X6
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Position
14:46033679..46038744
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AA seq
592 aa
AA seq
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MDLHNNVQPELGKLEQIVYQFLLKCLHIILDSRVPLLRPHDRSGDLSMGSRVKRSDKWFN
LALGDRPSALDNLHFWHRNLMDPMIIDIILVHEEAGSSVETVIERWVVQYDSPRVVAPQT
GDITSSYKKTYQKSIVLFRALYSQMRLLPAYKIFKQLSTSSHNCNFDIIYKVSSFSDPFS
RAEGGMMEEYNFIPVEALPGRLCISVTYRTALSDFNLECSASLPTKIITDYVGSPNTDPL
RSFPVLDKGVSATSFPLRRKEPPSSVPLDRPHSWTSGFHKAAPFVQNHPYVGSPPVYRGS
PRPYDYPSPPTDSYGVRLHNYRMQNRQGSPSYDEYQLSPPFSPSPSPSPPTYFCGGNPMQ
TRIRSETAPVTIPHSVMGKSSRNLSPNFSDPSRNSLPPLSPRRTDGSSQESPSGIRSFKK
LEASRTGQKFVRDSKEDSGRFSGLLSSSGSPHIGFSRTSSRLSFQDELDDGDFSCPFDVD
DVDPSDAQSSQNADRKSAAEITSTSLPMGKKSQDAEVGVLVHMLRTAPPLRQDPSCYSSH
SPKAELEGGVATASGFFMPRKTADALEELRGYKEMRDLLSKSGTRILNKHKA
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
atggatttgcataataatgtgcagcctgaattgggcaaattggagcaaattgtttatcaa
tttcttttgaagtgcttgcacatcattttggactcaagggtacctttgttacgcccgcat
gatagaagtggtgacttgtcgatgggttctcgcgtgaagaggagtgacaagtggtttaac
ttggcattaggtgataggccttctgctctggataacttgcacttctggcacaggaatttg
atggatccaatgataattgacattatacttgttcatgaagaggctggttcttctgttgag
acggttatagagaggtgggttgttcagtatgatagtccccgtgtagtggctcctcaaact
ggtgacattactagctcttacaagaagacataccagaagtcaatagtgcttttccgtgct
ctttattctcaaatgaggcttctcccggcttataagatatttaagcagttaagcacatct
agtcataattgtaattttgatattatttacaaggtctcttcctttagtgatccattctct
cgagcagaagggggaatgatggaagaatataatttcattcctgttgaggccctaccgggc
cgcctttgtatatctgtgacctaccgtactgcactatctgatttcaacctagagtgttca
gcttcattgccaacaaaaataattactgattatgttggaagccccaatactgaccctttg
aggtctttccctgtcttggataagggtgttagtgctacctcctttccactgagaaggaaa
gaacctccatcttctgtgccacttgatcgtcctcatagctggacatctggcttccataaa
gcagcaccttttgtacagaatcatccttatgttggctccccgccagtgtatcgaggttct
cccaggccatatgattatccatccccacctactgatagttacggcgtcagattgcacaac
tatcgaatgcagaatcggcaaggatctccaagttacgatgagtatcaactttctcctcca
ttttcaccctcaccatctccatcgcctcctacatacttctgtggtggcaatccaatgcaa
actcgcatacgttctgagacagcccctgtaactatacctcattcagtaatgggcaaaagc
tctagaaatctttctcctaatttttcagatcctagtcgaaattctctgccccctttatcc
cccagaaggactgatggttcatcacaagagtctccatctggaatcaggtcattcaagaaa
ttagaagcttcaaggactggtcaaaagtttgtcagagatagcaaggaagattcagggagg
ttctcaggattgttatcctcaagtggctcacctcacattggattttctagaacctcaagt
agattatcatttcaggatgagttggatgatggcgacttttcatgtccttttgatgttgat
gatgttgatccatcagatgctcaatccagtcagaatgcggatcggaagagtgctgcagag
atcacttcaacatcactgccaatggggaaaaaatcacaagatgctgaagttggtgttctt
gtgcacatgctcaggacagcgcctccattgcgccaagatccaagttgttattcatcccat
tcaccaaaggctgaacttgagggaggagttgccactgcttctggattcttcatgcctcga
aagacagcggatgcacttgaagaactcaggggttacaaagagatgagagaccttctttcc
aagagtggcactaggatcctgaacaaacataaagcttaa
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