Glycine max (soybean): 100818134
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Entry
100818134 CDS
T01710
Name
(RefSeq) exosome complex component RRP42
KO
K12589
exosome complex component RRP42
Organism
gmx
Glycine max (soybean)
Pathway
gmx03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gmx00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
100818134
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gmx03019
]
100818134
Messenger RNA biogenesis [BR:
gmx03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
100818134
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Cofactors
100818134
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
100818134
NCBI-ProteinID:
XP_003548054
UniProt:
I1MNS7
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Position
16:31407825..31412822
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AA seq
286 aa
AA seq
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MVGLSLGETHFIQGGIAQDLRCDGRKRLTYRPISVETGVIPQTNGSARVRMGATDVIASV
KAELGKPSLLQPDKGKVSIYVDCSSTAEPAFEGRGGDELAAELSNALQRCLLGGKSGAGA
GIDLSSLIVVEGKICWDLYIDGLVVSSDGNLLDALGAAIKAALSNTGIPRVQVAAGTSND
EHPEVDVSDEEFLQFDTSRVPVIVTLTKVGRHYIVDATSEEESQMSSAVSISVNRQGHIC
GITKRGGVGLDPSIILDMISVAKHVSEQLINKLDSEIASAEAEEES
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
atggtgggtttatctcttggagaaacacatttcatccaaggtggcattgctcaagatctt
cgttgtgatggtagaaagagattgacatatcgaccaatctctgttgaaactggagtgatt
ccccagaccaatggttcagcaagagtcagaatgggtgccacagatgtcattgccagcgtt
aaggctgaacttggaaagccaagcttgttgcaacctgacaaaggaaaagtctctatatat
gttgattgcagttcaacagcagagccagcttttgagggtagagggggtgatgagttggca
gcagaactgtcaaatgctcttcaacgctgtctcttgggtggtaaaagtggagcaggtgct
ggaattgatctctcatcgcttattgttgtcgaaggaaaaatttgttgggatctttacata
gatgggcttgttgttagttcagatggaaatttgttggatgctctaggcgctgccattaag
gctgctttgagcaatacaggtattccaagagtccaagttgctgctggaacatcaaatgat
gagcatccagaagttgacgtaagcgatgaggagtttctgcagtttgacacatcaagagtc
cctgtcatagttacactgactaaggttgggaggcactatattgtagatgcaacatcagaa
gaggaatcacaaatgagctctgctgtttctatttctgttaataggcaagggcacatctgc
ggcataaccaaacgtggaggtgtagggctggatccaagcatcattcttgatatgatatct
gtggctaagcatgtaagcgagcaattaataaacaaattggattcagaaatagcttctgct
gaagctgaagaggagtcatga
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