KEGG   Glycine max (soybean): 100818329
Entry
100818329         CDS       T01710                                 
Name
(RefSeq) uncharacterized protein LOC100818329
  KO
K10756  replication factor C subunit 3/5
Organism
gmx  Glycine max (soybean)
Pathway
gmx03030  DNA replication
gmx03410  Base excision repair
gmx03420  Nucleotide excision repair
gmx03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:gmx00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    100818329
   03410 Base excision repair
    100818329
   03420 Nucleotide excision repair
    100818329
   03430 Mismatch repair
    100818329
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:gmx03032]
    100818329
   03036 Chromosome and associated proteins [BR:gmx03036]
    100818329
   03400 DNA repair and recombination proteins [BR:gmx03400]
    100818329
DNA replication proteins [BR:gmx03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    100818329
  DNA Replication Termination Factors
   ELG1-RFC complex
    100818329
Chromosome and associated proteins [BR:gmx03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    100818329
DNA repair and recombination proteins [BR:gmx03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     100818329
  Check point factors
   HRAD17(Rad24)-RFC complex
    100818329
SSDB
Motif
Pfam: RFC_C DNA_pol3_delta2 RCF1-5-like_lid AAA Rad17 Sigma54_activ_2 DUF815 ABC_tran RsgA_GTPase AAA_5 AAA_22 nSTAND3 AAA_16 AAA_29 RuvB_N AAA_24 AAA_23 AAA_33 P-loop_TraG SprT-like ATPase_2 AAA_2 TsaE nSTAND1
Other DBs
NCBI-GeneID: 100818329
NCBI-ProteinID: NP_001241064
UniProt: C6TK80
LinkDB
Position
17:23856533..23868022
AA seq 354 aa
MLWVDKYRPKTLDQVMVHTDIARNLKKLVTEQDCPHLLFYGPSGSGKKTLIMALLRQMFG
PGAEKVKVDNRTWKVDAGSRSLDLELTTLSSANHIEMSPSDAGFQDRYIVQEVIKEMAKN
RPIDTKGKKGFKVLVLNDVDKLSREAQHSLRRTMEKYSAYCRLILCCNSSSRVTEAIRSR
CLNVRINAPSEEQIVEVLEFIGKKEGLQLPPGFAARIVEKSNRNLRRAILSFETCRVQQY
PFTNKQTIPPMDWEEYISEIASDIMKEQSPKRLFQVRGKLYELLINCIPPEIILKRLLYE
LLRKLDAELKHEVCHWAAYYEYRMRLGQKAIFHIEAFVAKFMSIYKSFLISTFG
NT seq 1065 nt   +upstreamnt  +downstreamnt
atgttgtgggtggacaaatatcgtcccaaaaccctcgaccaggttatggtccacaccgac
atcgctcgcaatctcaagaaattggtaacggaacaggattgcccccatttactcttctat
ggcccatctggctccggcaagaaaaccctaatcatggctcttctccgccaaatgttcgga
cctggtgccgaaaaggtgaaggtggataataggacctggaaagtggatgctgggagtaga
tctcttgatttagagctgacaacattatcaagtgccaatcacattgaaatgagtccgagt
gatgcaggctttcaggacagatacattgttcaggaagtaatcaaagaaatggctaagaac
agaccaattgatactaaggggaagaaaggatttaaagtacttgtgctcaatgacgttgac
aaactctctagagaagcccaacattctctccgcagaaccatggagaaatacagtgcttat
tgcagattaattctatgttgcaatagttcttctagagttacagaagcaatccgctctcga
tgtctcaatgtgcgaataaatgcaccaagtgaagaacagattgttgaagttttagaattc
attggtaagaaggaagggctgcaacttcctcctggttttgctgctcgcattgtggagaaa
tcaaatcgaaatttaaggagggccatattgtcatttgagacttgtcgtgtccaacagtat
cctttcactaacaaacaaacaattcctccaatggactgggaagagtatatttctgaaatt
gcatctgacataatgaaggaacagagcccaaaaaggttgtttcaagttcgaggaaagctc
tatgagctgctaatcaattgcattcctccagagataattttgaagaggcttctttatgag
ctattgaggaaactggatgcagaactaaagcatgaagtatgtcattgggctgcatattat
gaatataggatgcgtcttggacagaaggcgatctttcacattgaagcatttgtggccaag
ttcatgagcatttataaatccttccttatttcaacattcggctga

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