Glycine max (soybean): 100818387
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Entry
100818387 CDS
T01710
Name
(RefSeq) DEAD-like helicases superfamily protein
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
gmx
Glycine max (soybean)
Pathway
gmx03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
gmx00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100818387
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
gmx03041
]
100818387
03009 Ribosome biogenesis [BR:
gmx03009
]
100818387
Enzymes [BR:
gmx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
100818387
Spliceosome [BR:
gmx03041
]
Complex A
U1 snRNP components
U1 related factors
100818387
Complex B
100818387
Ribosome biogenesis [BR:
gmx03009
]
Eukaryotic type
Pre-60S particles
Helicases
100818387
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
SWI2_SNF2
PRAI
AAA_22
DUF58
Motif
Other DBs
NCBI-GeneID:
100818387
NCBI-ProteinID:
NP_001354011
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All DBs
Position
11:32929425..32940796
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AA seq
565 aa
AA seq
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MSYVPPHLRNPSSTTVATARTPSVTLDNHHHHHHKLAFASNTTTNCSPSLSSFHNNASRR
SSAAPPSPRILANPDTIFPQWQPSERVSRMTPEQIEEVRSRLNLDVAVASDSPPAPAPIE
SFTDMCLHPSIMKDIAYHEYTRPTSIQAQAMPIALSGRDLLGCAETGSGKTAAFTIPMIQ
HCLAQHPIRRNDGPLALVLAPTRELAQQIEKEVKAFSRSLESLKTAIVVGGTNIEKQRSE
LRAGVEIAVATPGRFIDHLQQGNTSLSRISFVVLDEADRMLDMGFEPQIREVMRNLPEKH
QTLLFSATMPVEIEELSKEYLANPVQVKVGKVSSPTTNVSQTLVKISENEKIDRLLDLLV
EEASQAEKCGHPCPLTIVFVERKTRCDEVAEALVAQGLSAVSLHGGRSQSEREAALHDFR
SGSTNILVATDVASRGLDVTGVSHVINLDLPKTMEDYVHRIGRTGRAGSTGLATSFYTDR
DMFLVANIRKAIADAESGNTLTFATGKVARRKEKEAAAAQKEANIALSKQLGLGAASMNI
EDKYKFMITATNTKKEGAADSAWDD
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtatgtgcctccgcacctcagaaacccgagttccaccaccgtcgccaccgccaga
accccctccgtaaccctagacaaccaccaccaccaccaccacaagctcgcattcgcctcc
aacaccaccaccaattgctctccatctctctcctccttccacaacaatgcctctcgccgg
agctccgccgcgcctccctcgccgcggattctcgccaaccccgacaccatcttcccccaa
tggcaaccctccgaacgcgtttcccgcatgactccggaacagattgaagaggtccggtcc
aggcttaatcttgatgttgctgtcgcatctgactctcctcctgcacctgctccaatagaa
tcgtttactgatatgtgtttgcatccgagtatcatgaaggacattgcttaccatgaatac
accaggccaacttcgatccaggcacaggccatgccaattgctctcagtggaagggatcta
ttgggttgtgctgaaaccggtagtggaaagactgcagctttcacaattcctatgatacag
cattgcttggcccaacatcccattcggcgcaatgatggtcccctggcattagttttggct
cctacgagagaacttgctcaacaaatagaaaaagaggttaaagcttttagcagatctctt
gagtcattaaaaactgccatagttgtgggcggaaccaacattgaaaagcagaggtctgaa
ctaagagctggagttgaaatagcagttgccacccctggaagattcattgatcatttacaa
caaggcaacacttccctctccagaatttcttttgttgttctagatgaggcagatagaatg
cttgatatgggttttgaaccacagataagagaggtaatgagaaatcttccagagaagcat
caaacactgctgtttagtgcgactatgcctgtggagattgaagaattatcaaaagagtac
ttagctaacccagtgcaagtgaaggtggggaaagtgagtagcccaacaactaatgtttca
caaactcttgtgaaaatttctgaaaatgagaagattgatcggcttctagatttgcttgta
gaggaggcatcacaggccgaaaaatgtggtcatccatgtccattaacaattgtgtttgtt
gagaggaagacaaggtgtgatgaagttgctgaagcattggtagctcaaggattatctgca
gtttctcttcatggtggtcgcagtcagagtgaaagagaagctgccttgcatgattttcgg
agtggctccaccaacattttggttgccactgatgtcgcgtctcgtggcttggatgtcaca
ggagtgtcacatgtcattaatctagatcttccaaagaccatggaagattatgtacaccgg
attggaaggacagggcgtgcgggatcaactggcttagctacttcattttacactgatcgc
gacatgttcctcgtggcaaatataaggaaagcaatagctgatgcagaatctgggaacaca
ctgacatttgcaaccggaaaggttgctagaaggaaggagaaagaagcagcagctgcacaa
aaagaggcaaatattgctttatccaaacagttaggattgggagctgcttcaatgaacatt
gaagataaatataaattcatgattactgccacaaacactaaaaaagagggagcagcagat
agtgcctgggatgattaa
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