Glycine max (soybean): 100818544
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Entry
100818544 CDS
T01710
Name
(RefSeq) chaperonin CPN60-2, mitochondrial
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
gmx
Glycine max (soybean)
Pathway
gmx03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gmx00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
100818544
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gmx03019
]
100818544
03110 Chaperones and folding catalysts [BR:
gmx03110
]
100818544
03029 Mitochondrial biogenesis [BR:
gmx03029
]
100818544
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
gmx04147
]
100818544
Enzymes [BR:
gmx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
100818544
Messenger RNA biogenesis [BR:
gmx03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
100818544
Chaperones and folding catalysts [BR:
gmx03110
]
Heat shock proteins
HSP60 / Chaperonin
100818544
Mitochondrial biogenesis [BR:
gmx03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
100818544
Exosome [BR:
gmx04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
100818544
Exosomal proteins of other body fluids (saliva and urine)
100818544
Exosomal proteins of breast cancer cells
100818544
Exosomal proteins of colorectal cancer cells
100818544
Exosomal proteins of bladder cancer cells
100818544
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
ChlI
Motif
Other DBs
NCBI-GeneID:
100818544
NCBI-ProteinID:
XP_003536270
UniProt:
I1LCI1
LinkDB
All DBs
Position
10:complement(42631676..42636234)
Genome browser
AA seq
577 aa
AA seq
DB search
MYRFATSLASKARIARSSTQQIGSRVSWNRNYAAKDIKFGVEARALMLKGVEELADAVKV
TMGPKGRNVVIEQSFGAPKVTKDGVTVAKSIEFKDKVKNIGASLVKQVANATNDVAGDGT
TCATILTKAIFTEGCKSVAAGMNAMDLRRGINMAVDTVVTNLKSRARMISTSEEIAQVGT
ISANGEREIGELIAKAMEKVGKEGVITISDGKTLYNELEVVEGMKLDRGYISPYFITNQK
NQKCELEDPLIIIHEKKISSINAIVKVLELALKRQRPLLIVAEDVESDALATLILNKLRA
GIKVCAIKAPGFGENRKSGLQDLAVLTGGQLITEELGLNLEKVDLEVFGSCKKITISKDD
TVILDGAGDKKAIEERSEQIRSAIENSTSDYDKEKLQERLAKLSGGVAVLKIGGASEAEV
GEKKDRVTDALNATKAAVEEGIVPGGGVALLYASSELDKLQTANFDQKIGVQIIQNALKT
PVHTIASNAGVEGAVVVGKLLEQNDPDLGYDAAKGEYVDMVKAGIIDPLKVIRTALVDAA
SVSSLMTTTEAIVSELPKDDKDVPAMGGMGGMGGMDY
NT seq
1734 nt
NT seq
+upstream
nt +downstream
nt
atgtaccgctttgcaacctccctcgcctccaaagctagaattgctaggagcagcactcaa
cagattggaagtagggtcagttggaacaggaattatgctgccaaagacattaagtttggt
gtggaggcccgggctttgatgcttaagggtgttgaagagctcgccgatgccgtcaaagta
accatgggccctaaggggcgtaatgtggttattgagcaaagttttggagcacccaaagtg
acaaaagatggagtaaccgttgctaagagcattgaattcaaggataaagtcaagaacatc
ggtgccagtctcgtaaagcaggttgccaatgctaccaatgatgtggctggtgacggaacc
acttgtgctacaattctcactaaagcaatatttacggaagggtgtaaatcagttgcagct
ggaatgaatgcgatggacctgagacgaggtataaatatggctgttgatactgtggtgaca
aatctgaaaagcagagcacggatgattagcacttctgaagaaattgcccaggttggaaca
atatctgccaatggggagagggaaattggtgagttaattgcaaaagctatggagaaagtt
ggcaaagagggtgtcatcacgatctcagatggtaagacattgtacaatgagttggaagtt
gtggaaggaatgaagctcgacaggggatacatttctccatatttcataacaaaccagaag
aaccagaaatgtgaacttgaggatcctctcattataatccatgaaaagaaaatctcaagc
ataaatgctattgttaaagtattagagttggctttgaagagacaaaggcctttactgatt
gtcgctgaggatgtggaaagtgatgcccttgcaactcttattctaaataaacttcgtgct
ggaatcaaggtatgtgccatcaaagctcctggttttggtgaaaaccgtaaatctggtctc
caggatcttgctgttcttacaggaggtcaacttatcactgaagagcttggcttgaatctt
gaaaaagtagatctggaggtgtttggctcttgcaagaagataacaatttctaaggatgac
actgtcatccttgatggagctggtgataagaaagcaattgaagaaagaagtgagcagatt
agatcagcaattgaaaatagcacttcagattatgacaaggaaaagttacaggaaagatta
gccaagctttctgggggtgttgcagtactgaagattggaggagccagtgaggctgaagtt
ggtgagaagaaggatagagtgacagatgccttaaatgcaaccaaggcagctgtagaggag
ggcatagtaccaggtggtggtgttgctcttctctatgcatcaagtgagttggataagctt
caaactgctaactttgatcaaaagataggggtccagatcatccaaaatgctttgaagact
cctgtgcacacaattgcttcaaatgccggagttgagggtgctgttgttgttggtaaacta
ttggaacagaatgatcctgatcttggatatgatgcagccaaaggtgaatatgttgatatg
gttaaagctggaatcattgatccattgaaggttattaggaccgccttggttgatgcagcc
agtgtgtcatctttgatgacaacaactgaagctattgtgtctgaactcccaaaggacgat
aaagatgttcctgccatgggtggcatgggtggtatgggtggcatggattattaa
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