Glycine max (soybean): 100818624
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Entry
100818624 CDS
T01710
Symbol
SNF5
Name
(RefSeq) chromatin structure-remodeling complex protein BSH-like
KO
K11648
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
Organism
gmx
Glycine max (soybean)
Pathway
gmx03082
ATP-dependent chromatin remodeling
gmx03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
gmx00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
100818624 (SNF5)
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
100818624 (SNF5)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
gmx01009
]
100818624 (SNF5)
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gmx03021
]
100818624 (SNF5)
03036 Chromosome and associated proteins [BR:
gmx03036
]
100818624 (SNF5)
Protein phosphatases and associated proteins [BR:
gmx01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
100818624 (SNF5)
Transcription machinery [BR:
gmx03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
100818624 (SNF5)
SWI/SNF complex
100818624 (SNF5)
Chromosome and associated proteins [BR:
gmx03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
100818624 (SNF5)
PBAF complex
100818624 (SNF5)
SWI/SNF complex
100818624 (SNF5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF5
Motif
Other DBs
NCBI-GeneID:
100818624
NCBI-ProteinID:
NP_001241294
UniProt:
D7RJ53
LinkDB
All DBs
Position
13:22068742..22072108
Genome browser
AA seq
240 aa
AA seq
DB search
MKTPISGFYRNPVKFRMPTAENLVPIRLDIEIEGQRYKDAFTWNPSDPDSEVVVFAKRTV
KDLKLPPAFVTQIAQSIQSQLSEFRSYEGQDMYAGEKIVPIKLDLRVNHTLVKDQFLWDL
NNFESDPEEFARIFCKDTGIEDPEVGPAIAFAIREQLYEIAIQSVVSARESRMSKKGRRG
AEYTPVSKGGAAAVDLVKLFGPKSSVVRKRKEWDVYEPIVDLLSNEEVDALEAKEERNFR
NT seq
723 nt
NT seq
+upstream
nt +downstream
nt
atgaaaactccgatttcgggtttctacagaaaccccgtgaagttcagaatgccaactgcg
gagaacttggttcccattcgattggacatcgaaatcgaggggcagagatacaaggacgcg
ttcacttggaacccttctgatcccgattccgaggttgtcgtctttgcaaaaaggactgtt
aaagacttgaagctccctcccgcctttgtaacacaaattgctcaatcaattcaatcacag
ctttcggagtttcggtcctatgaaggccaggatatgtatgctggggagaagattgttccg
atcaagcttgatcttcgtgttaatcatacgctcgtgaaggaccagtttttatgggacttg
aacaactttgagagcgatcctgaagagtttgccagaatcttctgcaaggacacgggcatt
gaagatcctgaggttggaccagctattgcctttgctatcagagagcagctttatgagatt
gcaattcaaagtgtggtttcagcaagagaaagcagaatgagcaagaagggtcgtcgaggg
gctgaatatactccagtcagtaaaggaggtgcagcagcagtggacttggtcaagttgttt
ggtccgaaatctagtgtagttcggaaaagaaaggagtgggacgtatatgaacctattgtg
gacctactatccaacgaggaagttgatgcccttgaagcgaaggaagagagaaatttcagg
tga
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integrated database retrieval system
