Glycine max (soybean): 100818807
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Entry
100818807 CDS
T01710
Name
(RefSeq) WD repeat and HMG-box DNA-binding protein 1
KO
K11274
chromosome transmission fidelity protein 4
Organism
gmx
Glycine max (soybean)
Brite
KEGG Orthology (KO) [BR:
gmx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
gmx03036
]
100818807
Chromosome and associated proteins [BR:
gmx03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Other sister chromatid cohesion factors
100818807
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mcl1_mid
WD40_WDHD1_1st
WD40
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EML_2
ANAPC4_WD40
Beta-prop_CAF1B_HIR1
Beta-prop_WDR19_1st
WDR55
Beta-prop_IFT140_1st
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
Ctf4_C
Beta-prop_IFT122_1st
WD40_MABP1-WDR62_2nd
EIF3I
Beta-prop_EML
WD40_MABP1-WDR62_1st
Beta-prop_WDR35_TULP_N
Beta-prop_Vps41
NBCH_WD40
Beta-prop_WDR75_1st
Beta-prop_HPS5
Beta-prop_RIG_2nd
WD_LRWD1
eIF2A
WDR90_beta-prop_4th
Histone_HNS_N
Beta-prop_SPT8
PEP5_VPS11_N
RAB3GAP2_N
Motif
Other DBs
NCBI-GeneID:
100818807
NCBI-ProteinID:
XP_003527122
UniProt:
I1KD46
LinkDB
All DBs
Position
6:19747017..19752537
Genome browser
AA seq
972 aa
AA seq
DB search
MKVRSMKLKEAHTAKSGGAAFCSVLWDQKAKHLITASSSDVAICIHDSLFPSLAPKTLRH
HRDGVTALALSPNSTCLASGSVDHSVKLYKYPGGEFERNITRFTLPIRSLAFNKSGSMLA
AAGDDEGIKLINTFDGTIARVLKGHKGSITGLAFDPNGEYLASLDSTGTVILWELQSGKI
IHNLKGIAPDTGLDVSTMNVLCWSPDGETLAVPGLKNDVVMYDRDTAEKVLSLRGDHIQP
ICFLCWSPNGKYIASSGLDRQVLIWDVDRKQDIDRQKFDERVCCMAWKPTGNALAVIDIM
GKYGIWDNVIPSSMKSPTEDIPVKSKSNGVVYFDEEDPENSASENSSDVGGNSNQESEPP
SRKRSRKQSLSEENSGEDGGEEIVSYPKVDTNKKRNRPSKENLDSVNMGFRGTMVTSKAK
MQEPFQPGSTPVQPGKRRFLCYNMLGCITSIEHDGYSHIEIDFHDTGSTPRVPSMTDHFG
FTMAALNESGSIFANPCKGENNMSTLMYRPFSSWANNSEWSMRFEGEEVKVVALGSAWVA
AVTSFNYLRIFSEGGLQRDVFSLDGPVVTASGFKDKLAVVTHATDGLLSNDQKLEFMVFN
IPRGTLLLQGRLPLSPGSSLSWFGFSEEGQLCSYDSKGVLRSYTSKFGGRWIPLFSATKE
KSDENYWVTGLNASKVFCVVCKKPEDFPQVMPKPVLTPLNLSFPLASSDLGGSEAHEKEF
MMNNLRLYEIQRTMDEMASVGLDTTSLDDDAFNFEAAQDKCILRLIAACCNSDKLVRATE
LVKLLTLEKSMRGAVKLVTAMKLPNLAERFSSILEERLLEEAKKAMETNIKENSVAPVTA
DALPNRSKAPTHTEALNAVTMSSSPKLSAPSFLRKDKTQERAKAGTSKTAMVNENLKVKQ
TGEETSDKVGKVVQQTSHPYDPSTKSSNKNGLNKSETSLGQSNRPSNPFLKSETSLEQSN
RPSNPFLKAIIK
NT seq
2919 nt
NT seq
+upstream
nt +downstream
nt
atgaaggtccggtcgatgaagctgaaggaggcccacaccgcgaagagcggcggcgcggcc
ttctgctccgtcctgtgggaccagaaagcgaagcacctgatcactgcgtcctcctccgac
gtcgccatctgcatccacgactcccttttcccctccctcgctccgaaaaccctccgccac
caccgcgatggcgtcaccgccctggccctcagccctaattctacttgcctcgcctccgga
tccgtcgaccactccgtcaagctctacaagtatcccggtggagaattcgagagaaatatt
acaaggtttacacttccaatacgttccctggcatttaacaaatctggaagcatgctggca
gcggctggtgatgatgagggtatcaagcttataaacacatttgatggtaccattgcgagg
gttctcaaaggacataaagggtctatcactggcttggcttttgaccctaatggcgaatac
ttagcgtccctggattcaactggaactgttattttgtgggagcttcagtctgggaaaatc
attcataacctcaaaggcatagctcctgacactgggctggatgtttcaactatgaatgtt
ctttgctggagtcctgatggtgagaccttagctgttcctgggttgaaaaatgatgtagta
atgtatgatagggacactgccgagaaggtgttatctttgagaggtgatcacatacagcca
atatgtttcttgtgttggtcacccaatggaaagtacattgcttcctctggtttagatagg
caggttctgatttgggatgttgataggaagcaggatattgatagacagaagtttgatgag
agagtgtgttgcatggcgtggaagccgactgggaatgcattggctgttattgatattatg
gggaagtatggtatttgggacaatgttattccttcgtctatgaagtccccaaccgaggat
atacctgtgaagagtaaaagcaatggggttgtttattttgatgaggaggatcctgaaaat
agtgcaagtgaaaactcgagtgatgtgggtggaaatagtaaccaggagtctgagccacca
agcaggaaaagatcccgtaaacagtctctgagtgaggaaaattctggtgaggatggaggt
gaggaaattgtatcatatccaaaggttgatactaacaagaaacgaaatcgaccaagcaag
gaaaatttggatagtgtgaatatgggatttagaggcaccatggtaacatccaaggcaaag
atgcaggagccatttcaaccaggatctactcctgtgcagcctgggaaaaggcgtttctta
tgctacaatatgcttggatgtataacctctattgagcatgatggatactcccatattgag
attgattttcatgatactggaagcactccacgagttccttcaatgactgatcattttgga
tttacaatggcagcattgaatgagagtgggagcatatttgcaaatccttgtaagggggag
aataatatgagcacccttatgtatcgtccatttagtagctgggcaaataatagcgagtgg
tctatgcgctttgaaggagaagaagtgaaggttgttgcacttggttctgcttgggttgca
gcggtaactagttttaactatcttcgcatcttttctgaaggtggtttgcagagagacgtg
ttttcactagatgggccagtggtgacagcatccggtttcaaggataagcttgcagttgtc
actcatgctactgatggccttctctcaaatgatcagaagctagagtttatggtatttaat
attcctcgtgggaccctacttcttcaaggtcgcttgccactatcccctggttcatcccta
agttggtttgggtttagtgaagaaggccaattgtgttcatacgattcgaagggtgtgcta
agatcatatacaagcaaatttgggggcagatggattccactcttcagtgctactaaagag
aagtcagatgaaaactattgggtgactgggttgaatgcaagcaaggtattttgcgtggta
tgcaaaaagcccgaagacttccctcaggtgatgcctaagccagttctcaccccgttgaat
ctttcgtttcctcttgcttcctctgacttggggggatctgaagcccatgaaaaggagttt
atgatgaacaacttgcgtctctatgagattcagagaacaatggacgaaatggcttctgtt
ggtctggatactacttcacttgatgatgatgctttcaatttcgaagcagcacaagataaa
tgcatactgaggctcatagcagcatgctgcaacagtgataagcttgtgcgagctactgaa
cttgtgaagcttttgactctggaaaaatcaatgagaggtgcagtaaaacttgttactgct
atgaagcttccaaacttggccgaaaggttcagcagcatattagaggaaaggctacttgaa
gaagccaaaaaagctatggaaaccaacatcaaagaaaatagtgttgcacctgttacagct
gatgctcttcctaacagaagcaaggccccaactcacactgaagcattaaatgcagttacc
atgtcatcatctccaaaattatctgctccgtcattcctaaggaaagacaaaacacaagag
agagctaaagctggcacaagcaaaactgcaatggtaaatgaaaatttgaaggtaaagcag
acaggggaggaaacaagtgacaaggtggggaaggttgtgcaacaaacttctcatccgtat
gatccctctacgaagtcctcaaataagaatggacttaacaagtcagagactagtttggga
caatcaaatcgtccttccaatccatttttgaagtcagaaactagtttggaacaatcaaat
cgtccgtccaatccatttttgaaggctattatcaagtga
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