Glycine max (soybean): 100818971
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Entry
100818971 CDS
T01710
Name
(RefSeq) DNA topoisomerase 3-alpha isoform X1
KO
K03165
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
gmx
Glycine max (soybean)
Pathway
gmx03440
Homologous recombination
gmx03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
gmx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
100818971
03460 Fanconi anemia pathway
100818971
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gmx03032
]
100818971
03400 DNA repair and recombination proteins [BR:
gmx03400
]
100818971
Enzymes [BR:
gmx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
100818971
DNA replication proteins [BR:
gmx03032
]
Eukaryotic type
DNA Topoisomerases
100818971
DNA repair and recombination proteins [BR:
gmx03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
100818971
FA (Fanconi anemia) pathway
100818971
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim
Zn_ribbon_GRF
Zn_ribbon_Top1
zf-CCHC
Zn_ribbon_GRF_2
Motif
Other DBs
NCBI-GeneID:
100818971
NCBI-ProteinID:
XP_003526873
UniProt:
K7KV90
LinkDB
All DBs
Position
6:complement(12672045..12722681)
Genome browser
AA seq
913 aa
AA seq
DB search
MNVLNVAEKPMVARTVATILSRNQNMRMREGRSRYNKIFEFNYTIRGQPCHMIFTSVTGH
LMELEFDDRYRKWHSCDPADLFRAPVHKFVPEDKKDIKRTLEEEARRCQWLILWLDCDVE
GENIAYEVIDVCTAVNPHLTIKRAWFSTLIDRDIHNAAQNDLRDPDKRVADAVDVRQEID
LRIGASFTRFQTMLMKDAFIIDTATDDRNRVLSYGPCQFPTLGFVVERFWEIQAHEPEEF
WSIICSHESKEGTAEFSWMRGRLFDYTCAVIIYEMCVEEPTATVTNIRQQEKPKYPPFPL
NTIELQKRASRYFRMSSDHTMKVAEELYQAGFISYPRTETDSFSPGTDLHTIVQEQQGHP
EWGIYAQRLMDPEAGLWRNPRGGGHDDKAHPPIYPTKFSTGESGWSQDHRKLYELVVRHF
LACVSKPALGAETTVEINIAGELFSACGRVILEKNYLDVYRYESWGGSMIPTYTNGQQFN
PTKLTLESGVTRPPPLLSEADLLSYMDREEAKIGTDATMQDHIKKMLDRSYATKDSSTRF
TPTNLGEALVLGYDDIDMTYKLWKPDLRSEMEKKMDDVKKGDKSKAEVLVTILQKMEACF
LEARLNKVKLLEAMAIFFERSTRSSSDELHATGEVVRRCGLCQESDMLLRKNRDGNFMVG
CMGYPQCRNAVWLPGSVSEAVVTTNTCNFCTPGPVYLIQFKFRRLEIPPNYSPNHLGCIG
GCDEILAQLTEICGRGPRMPARPRGPTAPTSNAHHTNPRQGACMNCRETGHSSTDCPLRY
GNVQHHGTSEHNGEASVSCSSCGTPCVLRTANTVNNRGRKFYSCQSQECNFFVWEDSLNA
GTGGRSVTRSNSIPALNPRQTGGRGSRGRGGQYGSRTANTTFMSATGDPISGRRCYTCGD
PSHFANVCPHRGV
NT seq
2742 nt
NT seq
+upstream
nt +downstream
nt
atgaacgttctgaacgtggcggagaagcccatggtggcgaggacggtggccacaatcctc
tcgaggaaccagaacatgcgaatgagagaagggcgttcccgctacaacaagatctttgag
ttcaactacaccattcgcggccagccctgccacatgatcttcacctccgtcaccggccac
ctcatggaactcgaattcgacgaccgttaccgcaagtggcactcctgtgaccccgccgat
ctcttccgcgctcccgttcataaattcgtccccgaggacaagaaggatatcaagaggacg
ctggaggaggaagccaggaggtgccagtggcttattttatggctcgattgtgacgttgag
ggcgagaacatcgcgtatgaagtcattgacgtgtgcactgcagtgaatcctcaccttacc
ataaagcgtgcttggttttctacattgattgacagggatatccataatgcggcacaaaat
gatcttagagatccggacaagagggtggctgatgctgtggatgttagacaggaaatagac
cttcgtataggtgcttctttcaccagattccagaccatgttaatgaaagatgcttttatc
attgacactgctacagatgacagaaatcgtgtcttaagttacggcccttgccagtttcct
acgcttggatttgtcgtggaaagattctgggagatacaagctcatgagccagaagagttt
tggtcaatcatttgctctcatgaatcaaaggaaggcactgctgaatttagctggatgcgg
ggccgcttgtttgattatacttgtgcagttataatatatgagatgtgtgttgaggaacca
acggcaactgtcacaaacattagacaacaggagaagccgaaatatcctccatttccttta
aatactattgagcttcaaaaacgtgcttcaagatacttccggatgagttctgatcacaca
atgaaggtagcagaagaactttaccaagctggttttatcagttatcctcgtacagaaact
gatagcttttctccagggactgatttacatacaattgtgcaagaacaacaagggcatcct
gagtggggaatatatgcacaacggttgatggaccctgaggcggggctttggagaaaccct
agaggtggtggacatgatgacaaggctcatccacccatttaccccacaaaattttctact
ggagaatctggatggagccaagaccaccgtaaactgtatgagcttgttgttcgccacttt
ttggcatgtgtctcaaagcctgctttaggagctgaaaccactgttgaaattaatattgct
ggtgaattattttctgcatgcgggagagtgattctagagaaaaactacttggatgtttat
cgttatgaatcttggggtggatcaatgattccaacatatactaatggtcaacagttcaat
ccaaccaaattaacccttgaatcaggagtaacccgaccaccaccacttcttagtgaagct
gatctactgagttatatggatagggaggaggcgaaaattggtacagatgctacaatgcaa
gatcacatcaagaagatgcttgatcgatcttatgcaactaaggatagtagcactcgtttc
acaccaactaatcttggtgaggcacttgttttgggttatgatgacattgacatgacgtat
aaactatggaaaccagatcttagaagtgaaatggaaaaaaagatggatgacgtcaagaaa
ggagataaaagcaaagccgaagttttggtaactatcttgcagaagatggaagcttgtttc
ctagaagcgagattgaataaagtgaaacttttagaagccatggcaatattttttgaaaga
tctactagatctagcagtgatgagctgcatgcaactggagaagttgttcgacgatgtgga
ctttgtcaagaatcagacatgttgctaaggaaaaatcgagatggcaattttatggttgga
tgtatgggttaccctcagtgtaggaatgctgtttggcttcctggatcagtatctgaagca
gttgtgacgaccaatacttgcaatttttgtactcctggtcctgtttacttgattcagttc
aagtttaggcggctggagataccaccaaactacagtcccaaccatttaggttgcattggt
ggctgtgatgagattcttgcacagttgacagaaatatgtggcaggggccctcgcatgcca
gcaagacctcgaggaccaactgcaccaaccagcaatgcccatcatactaacccaaggcaa
ggagcttgcatgaactgtcgagaaacaggacattcttccactgattgtcctttacgttat
gggaatgttcaacatcatggaacaagtgaacataatggggaagcttctgtttcatgcagt
tcgtgtggaacaccatgtgttttgcgaactgcaaatacagtaaacaacaggggaaggaag
ttctactcgtgtcaatcacaggaatgcaacttctttgtatgggaggatagcctcaatgct
ggcactggaggcagaagtgttacacgctcaaatagtattccagccttgaatcctaggcaa
actggtggacgtggatctcgtggtagaggtggtcagtatggatctcgtactgctaacaca
acatttatgtcagccactggagatcctatttctggtagaagatgctatacgtgtggtgat
ccatctcactttgctaatgtctgcccccatcgtggtgtctga
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