KEGG   Glycine max (soybean): 100819332
Entry
100819332         CDS       T01710                                 
Name
(RefSeq) protein RRP6-like 2 isoform X1
  KO
K12591  exosome complex exonuclease RRP6 [EC:3.1.13.-]
Organism
gmx  Glycine max (soybean)
Pathway
gmx03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:gmx00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    100819332
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:gmx03019]
    100819332
Messenger RNA biogenesis [BR:gmx03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Exosome cofactors
     100819332
SSDB
Motif
Pfam: DNA_pol_A_exo1 HRDC PMC2NT Antig_Caf1
Other DBs
NCBI-GeneID: 100819332
NCBI-ProteinID: XP_003525715
UniProt: K7KNU4
LinkDB
Position
5:complement(14538048..14561291)
AA seq 877 aa
MNVDHDQPPSVAKAQALQTLTAGSLSSSVAKLAASSRCIPSDKDFHFYRNFEEFKVPVDE
IARESRSMLEAFGAVAAHAAFPGDVDDDAAYDWLVNANDDILERFDVSADEFRKVLQEEE
ARRPAMHSMEEDGFQLVSGRKKKGGRGNVTLAATDSETVASPGVTVATKDKKTMGPKSKV
PFHIPTIRRPQDEYSIVVNNANMPFEHVWLQRSDDGLRFIHPLEKLSVLDFVDTNLEDVV
PVKPPSIESTPFKLVQEVKDLKELVAKLRSVNEFAVDLEHNQYRSFQGLTCLMQISTRTE
DFVVDTLKLRIHIGPYLREIFKDPAKRKVMHGADRDIVWLQRDFGIYICNLFDTHQASKL
LNLERNSLEHILHHFCEVTANKEYQNADWRLRPLPNEMLRYAREDTHYLLYIYDLMRIRL
FALSKESESSESSDTPPVEVYKRSYDVCMQLYEKEFLTENSYLHIYGLQGAGFNAQQLAI
VSGLCEWRDIVARAEDESTGYVLPNKSVLEIAKQMPLTTSKLRRLVKSKHPYVEHNLDTV
VSIIRHSIQNSAAFEEAAQQLKEAQAGTASDVVPFTDGTEDPQSHTQDSKESSNHQDTNV
PINLKSNSLRSEPPKDSLTIADQNRDANVGALSTTKGNGATVQVLKKPTGAFGALLGNSA
SKRKLGPDKGKEDSKLEQIRSSVSLPFHSFLGSSEKSEPTVETHTVASEMLESQRPVSDV
VSVSPLDEIIMLESGTGAENMEQNNLESSSEHREKDSVVSISGKEDEDESVSLLELSSNF
KKCFHSNDQNYKTRWPKKTEQPSGLVPMKPFDYEAARKHVKFGEHTKHASSKGSDSHMEV
EDSGSKKQRSTIGQGQLPQGRRRQAFPASGNRSSTFR
NT seq 2634 nt   +upstreamnt  +downstreamnt
atgaacgtggatcacgatcagcctccctcggtggccaaggcccaagcgctgcagacccta
acggcaggttctctctcgtcgtcggtggcgaagctcgccgcatcctcgcggtgcatccct
tccgacaaggacttccacttctaccgcaacttcgaggagttcaaggtccccgtcgacgaa
atcgcgcgggagtctcggtcgatgctcgaggccttcggcgctgtggcggcccacgcggcg
ttccctggcgacgtcgacgacgacgccgcttacgactggctagtgaacgcgaatgacgac
attttggagcggttcgacgtgtcggcggacgagttccggaaggtgctgcaggaggaggag
gctcggcgtccggcgatgcattccatggaggaagacgggtttcagttggtttctgggagg
aagaagaaaggggggagaggaaatgtgactctggcggctacggattctgagacggtggcg
tcaccgggagttacggtggcaaccaaggataagaagacgatggggccgaagtcgaaggtt
ccgtttcatataccgacgattaggaggccgcaggatgagtatagtatagtggttaataat
gcgaacatgccgtttgagcatgtttggttgcagaggagtgatgatgggttgaggttcatt
catccactggaaaaactatctgttttggattttgttgatacaaatcttgaggatgttgtg
ccagtgaagcctccctcaatagaaagcaccccttttaagctcgtgcaggaagtcaaagat
ttaaaagagttggtggctaagctgcgttctgtgaatgaatttgcggttgatttggaacat
aatcaatatcggtctttccaaggtttgacttgcctgatgcaaatttcaacaaggaccgaa
gattttgttgttgacacattgaaacttcgcattcatattggaccctatctaagggaaatc
ttcaaggaccctgccaaaaggaaggtcatgcatggtgcggatcgagatattgtgtggctt
caacgagactttggaatttatatttgtaatttgtttgacactcaccaggcttcaaagttg
ctaaacttggagagaaatagtttggagcatattctacatcatttttgtgaagttactgca
aacaaagaataccaaaatgcagactggagactacgtccacttcctaatgagatgctaaga
tatgccagagaagatacacactatctgttgtatatatatgacttaatgaggattaggtta
tttgccttgtctaaggagtctgaaagttccgagtcttcagacactcctccagtggaggtc
tacaaacgcagttatgatgtttgcatgcagctatatgagaaagaatttctgacagagaac
tcctatcttcatatatatgggttgcagggggccggtttcaatgctcaacaacttgctatt
gtttctgggttgtgtgaatggagggacattgttgcccgtgcagaggatgagagtacagga
tatgtattgccaaataaatctgttcttgaaatcgctaagcagatgcctcttactacaagc
aagctacggcgattggtgaagtcaaaacacccttatgttgaacacaatcttgatactgtt
gtcagcatcattaggcattctattcagaattcggctgcatttgaggaagctgctcaacag
ttgaaagaggcacaagctggcactgcatcggatgtagtaccctttacagatggaactgaa
gatccccaatcccatacacaagattctaaggaatcttctaatcatcaagatacaaatgta
ccaataaatcttaagtccaatagtcttagatccgagccaccaaaggatagtctcacaatt
gcagatcagaatagggatgctaatgttggtgcactttctactacaaagggaaatggagca
actgttcaggtgctaaaaaagcctactggtgcttttggggcactccttgggaattctgct
tcaaagaggaagcttggtcctgataagggcaaggaagacagcaagctagagcagattaga
tcttctgtcagtcttcctttccattcatttttgggtagcagtgaaaagtcagaacctaca
gtagaaactcatactgtagcatctgaaatgttagagtcacagagacctgtttctgatgta
gtttctgtctctcctctagatgagattataatgctagaatcaggcacgggtgcagagaat
atggagcagaataacctagaaagctccagtgagcacagggagaaagattctgttgtgtcc
atttcgggaaaagaggatgaagatgagtcagtatcactgttggaattgtcatcaaatttt
aaaaaatgctttcattcaaatgatcaaaattataaaaccagatggcccaagaaaactgaa
cagcccagtggcttagtgccgatgaagccatttgattatgaagctgcaaggaaacatgtt
aagtttggagaacatacaaagcatgcatcttccaagggttctgatagtcatatggaggta
gaggactcaggcagcaagaagcagcggtcaacaataggacagggacaattgccacaaggt
agaagacgtcaggcatttcctgcttctgggaatcgtagttcaacattccgctga

DBGET integrated database retrieval system