Glycine max (soybean): 100820332
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Entry
100820332 CDS
T01710
Name
(RefSeq) LOW QUALITY PROTEIN: probable polygalacturonase At3g15720
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
gmx
Glycine max (soybean)
Pathway
gmx00040
Pentose and glucuronate interconversions
gmx01100
Metabolic pathways
Module
gmx_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
gmx00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
100820332
Enzymes [BR:
gmx01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
100820332
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Beta_helix
End_N_terminal
Rv2525c_GlyHyd-like
Motif
Other DBs
NCBI-GeneID:
100820332
NCBI-ProteinID:
XP_025983624
LinkDB
All DBs
Position
Unknown
AA seq
388 aa
AA seq
DB search
MQSLITCVLIIAFISPCLCHRWNVGTQNTIYNVIDFGAVGDGKTDDTQAFLKAWQSMCEA
QGTSTLLIPPNKVFLVTSMLXKGPCVAPSVQIQLQGVIVAPTKDAWVEGNLNTLIMISNV
NGLTIDGSGGLIDGYGSAWWACKSCPRPSVLIINSCNSVSVTNLNMINSPKSHIHVNGCE
GATFSHINISAPGDSPNTDGFDISTSKNIMIEDSTIATGDDCIAISGGSSYINVTGIACG
PGHGISIGSLGKKFDTVQEVYVRNCSFIRTTNGARIKTFPNGMGYAKQITFEDITLEQTR
NPIIIDQEYRDLTNQAVEVSDVTYRGIHGTSLDGRAITLDCGESGCYGIVLDQINIVSCL
TGKSASCFCNNAHGTATATNPNCTCLLP
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
atgcaaagcctaatcacttgtgttttgattattgcttttatttcaccatgtttatgtcat
aggtggaatgttggaacccaaaacacaatttataatgtgatagattttggtgccgtggga
gatggcaaaacagacgatacacaagcatttttaaaagcatggcaaagcatgtgtgaagca
caagggacatcaactctattaataccaccaaacaaagtattcttggtgacgagcatgtta
nctaaaggtccttgcgtcgccccaagtgttcaaattcagcttcaaggggtaatagttgca
cctaccaaggatgcatgggtggaaggtaatctgaatactttgattatgatctcaaatgta
aacggtctcacaattgatggaagtggtggattaatcgatggctacggttctgcttggtgg
gcatgcaaatcttgtccacgaccatcggttcttattatcaattcctgcaattctgttagt
gttactaatctgaacatgattaatagtccaaaatctcacatacacgtaaatggttgtgag
ggtgccacattttctcatattaatattagtgctcccggtgatagtcctaacactgatgga
tttgacatttctacttccaaaaatatcatgatcgaagattcaactatagccaccggtgat
gattgtattgccatcagtggtggctcctcctacatcaatgttactgggattgcttgtgga
ccaggccatggaataagcattggcagcctcggtaaaaagtttgatacagtccaagaagtt
tatgtacgaaattgcagcttcataagaactacaaatggagcaagaatcaagacatttcca
aatggaatgggttatgcgaaacaaattacttttgaggatatcaccttagaacaaactcgc
aacccaataattatagatcaagaatatcgtgatttaacgaatcaagcagttgaagtcagt
gatgtgacatacagaggaattcatggaacatctctagatggaagagctattaccttagat
tgcggcgagtctggttgttatggaattgtattggatcaaatcaacattgtctcttgttta
acaggaaagtctgcttcgtgtttttgcaataatgctcatggaacagctacagctacaaat
ccaaattgtacttgcttattaccatga
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