Glycine max (soybean): 100820344
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Entry
100820344 CDS
T01710
Name
(RefSeq) THO complex subunit 4D isoform X1
KO
K12881
THO complex subunit 4
Organism
gmx
Glycine max (soybean)
Pathway
gmx03013
Nucleocytoplasmic transport
gmx03015
mRNA surveillance pathway
gmx03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
gmx00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100820344
09122 Translation
03013 Nucleocytoplasmic transport
100820344
03015 mRNA surveillance pathway
100820344
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gmx03019
]
100820344
03041 Spliceosome [BR:
gmx03041
]
100820344
Messenger RNA biogenesis [BR:
gmx03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
100820344
TREX complex
100820344
Spliceosome [BR:
gmx03041
]
Complex C
Other components
EJC/TREX
100820344
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
100820344
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
FoP_duplication
Motif
Other DBs
NCBI-GeneID:
100820344
NCBI-ProteinID:
XP_003537446
UniProt:
I1LMC1
LinkDB
All DBs
Position
11:complement(35912364..35917536)
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AA seq
298 aa
AA seq
DB search
MASSLDMSLDDRIKNRSNNRGRGRGGRGRAHSGRGPSGTLNGRRMVGAVNSRRMAGAGNG
GRTTGAVRRGPLMVNTRPSSYAIAKSIRRARPFPWQHDLFEDSLRAAGIQGVEVGTKLYV
SNLDHGVTNEDIRELFSELGELKRFAVHYDKNGHPSGSAEVVYTRRSDAFAALKRYNNVL
LDGKPMKIEIVGSNSELPISARVNVTGVNGRRKRTVVMTSRGGQAGGGPAMPTRGAGWGR
RGGPRSGSGRGGAGGRGRGRGRGGAGGRGRGRKDAVEKSAEELDKELETYHAEAMNIS
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
atggcttcttccttggacatgtcacttgatgatagaataaagaacagaagtaacaacaga
gggagaggtagaggaggacgtggcagagctcattctggccgtggaccaagcggcactctt
aatggtagaagaatggttggtgctgttaatagtagaagaatggctggcgctggtaatggt
ggaagaacaactggtgctgttcgtagagggcctcttatggttaacactcggccgtcgtcg
tatgctattgccaagtctattcgcagagctaggccttttccatggcagcatgatttgttt
gaagatagcctaagagctgcagggattcaaggagtagaagttggcaccaagttgtatgtt
tccaatttggaccatggagtgaccaatgaagacataagggaacttttctctgagcttgga
gagttgaagcgttttgctgttcattatgacaaaaatggacatccaagtggttcagctgaa
gtcgtttatactagaagaagtgatgcatttgctgcccttaaacgatataataacgtactt
ttggatggaaagcccatgaagattgagattgttggttccaattcagaattgcccataagt
gctcgggtaaatgtcactggggtgaatggacgtaggaagaggactgttgtaatgacgtct
agaggtggacaagctggaggtggtcctgctatgcctacacgtggtgctggttggggacgt
cgaggtggcccaaggagtggcagtggacgtggtggagctggaggtcgaggtcgtggtcgc
ggcaggggtggagctggaggtagaggtcgtgggagaaaggacgctgttgagaagtcagcg
gaggaacttgacaaggagctggagacctatcatgctgaggccatgaacatctcttga
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integrated database retrieval system
