Glycine max (soybean): 100820523
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Entry
100820523 CDS
T01710
Name
(RefSeq) CLIP-associated protein
KO
K16578
CLIP-associating protein 1/2
Organism
gmx
Glycine max (soybean)
Brite
KEGG Orthology (KO) [BR:
gmx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
gmx03036
]
100820523
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
gmx04812
]
100820523
Chromosome and associated proteins [BR:
gmx03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
100820523
Cytoskeleton proteins [BR:
gmx04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Cytoplasmic linker proteins (CLIPs)
CLIP-associating proteins
100820523
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLASP_N
CEP104-like_TOG
XMAP215_CLASP_TOG
HEAT_EF3_N
HEAT
Vac14_Fab1_bd
HEAT_EZ
HEAT_2
HEAT_Maestro
Cnd1
PDS5
TOR1L1_N
Adaptin_N
INTS1_R4
Tti2
TTI1
UTP20
MMS19_C
TPR_TTI1_C
HEAT_DAAF5
Dopey_N
V-ATPase_H_N
Npa1
Motif
Other DBs
NCBI-GeneID:
100820523
NCBI-ProteinID:
XP_003554315
UniProt:
I1N9Y3
LinkDB
All DBs
Position
19:43688265..43702388
Genome browser
AA seq
1444 aa
AA seq
DB search
MEEALELSRAKDTKERMAGVERLHQLLEASRKSLSSSEVTSLVDTCMDLLKDNNFRVSQG
ALQALASAAVLAGEHFKLHFNALLPAVVDRLGDAKQPVRDAARRLLLTLMEVSSPTIIVE
RAGSFAWAHKSWRVREEFTRTVTAAINLFASTELPLQRAILPPVLHLLNDPNPAVREAAI
LCIEEMYTQAGPQFRDELHRHNLPSSLVKDINARLEGIQPKVRSSDGIPGGYITGEIKHV
SVNPKKSSPKAKSSSRENSLFGGEGDITEKPIDPVKVYSDKELIREFEKIASTLVPEKDW
SIRIAAMQRVEGLVLGGAVDYPCFCGLLKQLVGPLTTQLSDRRSTIVKQACHLLCFLSKE
LLGDFEACAEMLIPVLFKLVVITVLVIAESADNCIKTMLRNCKVARVLPRIADCAKNDRN
AVLRARCCEYAYLVLEHWPDAPEIHRSADLYEDLIKCCVSDAMSEVRSTARMCYRMFAKT
WPERSRRLFSSFDPAIQRLINEEDGGMHRRHASPSIRDRGALMSLSSQASAPSNLPGYGT
SAIVAMDRSSSISSGTSISSGILLSQAKSLGKGTERSLESMLHASKQKVSAIESMLRGLD
LSDKHNSSSLRSTSLDLGVDPPSSRDPPFPAAVPASNHLTSSLTESTTSGINKGSNRNGG
LGLSDIITQIQASKDSAKLSYRSNVGIEPLSSLSSYSSKRASDRQERSSLDDNNDMRETR
RYMNPNTDRQYLDAPYRDGNFRESHNSYVPNFQRPLLRKNVAGRMSASRRRSFDDNQLSL
GEMSNFADGPASLHEALSEGLSSGSNWSARVAAFNYLHSLLQQGPKGTLEVVQNFEKVMK
LFFQHLDDPHHKVAQAALSTLADIVPVCRKPFEGYMERILPHVFSRLIDPKELVRQPCST
TLEVVSKTYSIDSLLPALLRSLDEQRSPKAKLAVIEFAINSFNKHAMNPEGAANIGILKL
WLAKLTPLVNDKNTKLKEAAITCIISVYSHFDSTAVLNFILSLSVEEQNSLRRALKQYTP
RIEVDLINYLQNKKEKQRSKSSYDPSDVVGTSSEDGYVGYSRKAHYLGKYSAGSLDGDGG
RKWSSQDSTLIKASLGQASSGETREHLYHNFETDPNSGSLGSKTKDLAYAVNPMGQNIGS
QTSQHGHVDSSVSLEGLSIPRLDVNGLMPSEHLNGTEGYVNDKEHPSELERNHHSAEDVK
INSMTDTGPSIPQILHMICSGGDGSPISSKRTALQQLVEASITNDHSVWTKYFNQILTVV
LEVLDDSDSSVKELALSLIVEMLKNQKGAVENSVEIVIEKLLHVTKDIIPKVSNEAEHCL
TIVLSQYDPFRCLSVIVPLLVTEDEKTLVICINCLTKLVGRLSQEELMTQLPSFLPALFE
AFGNQSTDVRKTVVFCLVDIYIMLGKAFLPYLQGLNSTQLKLVTIYANRISQARTGKAID
AVQD
NT seq
4335 nt
NT seq
+upstream
nt +downstream
nt
atggaggaagcgctggaactgtcacgcgccaaggacacgaaggagaggatggcgggcgtg
gagcgcctccaccaacttctagaagcttccagaaagagcctatcctcttccgaggtcacc
tcgctcgtcgatacgtgtatggatctcctcaaggacaacaacttccgcgtctcccagggc
gcgctccaggccctcgcctccgccgccgtcctcgccggcgaacacttcaagctccacttc
aacgccctcctccccgccgtcgtcgaccgcctcggcgacgccaagcagcccgtccgcgac
gccgcgcgccgcctcctcctcactctcatggaggtttcttctcctacaataattgttgaa
agagcagggtcctttgcttgggcacataaaagctggagagttagagaagagtttacacga
actgtcacggctgcaattaatctatttgcatctactgagcttccactccaacgggctatc
ctcccccctgttttgcatttgcttaatgatccaaatcctgctgtaagggaagcagctatt
ttgtgcattgaggagatgtatacacaagctggacctcaatttcgtgacgaacttcatcgc
cacaatcttccttcatctttggtgaaagatattaatgccaggcttgagggaatccaacca
aaagttcgctcttccgatggcattccaggtggatatattactggggaaattaaacatgta
agtgttaatcccaagaaaagtagtccaaaggctaaaagttcctcaagggagaactctctt
tttggaggagaaggtgacatcactgagaaacccatagaccctgtcaaggtatattcagat
aaggagttaatcagggaatttgagaagattgcatctacccttgtgcctgaaaaagactgg
tcaattcgaattgctgctatgcagagagttgaaggtcttgttcttggaggtgctgtggat
tatccatgtttttgtgggctcctgaagcaacttgttggacctttaaccacacaattgtca
gaccgaagatctaccattgtgaagcaggcttgccatctattgtgctttttgtcaaaggaa
ctcttgggtgattttgaggcatgtgctgaaatgttgataccagtccttttcaagctggtt
gtgattactgtgcttgtaattgcagagtctgcagataactgcattaaaacgatgctgcgc
aactgcaaagttgctcgtgtgcttccccgtatagccgattgtgcaaaaaatgatcgcaat
gcagtacttcgtgcaaggtgttgtgaatatgcttatttggtcctagaacattggcctgat
gcaccagaaatacatcgatcagctgatttatatgaggatctgataaagtgttgtgtttca
gacgcaatgagtgaggtacggtctactgcaaggatgtgctacagaatgtttgccaaaact
tggcctgagcgttctcgtcgcctattttcatcctttgaccctgctattcaacggttaata
aatgaagaggatgggggaatgcatcggcgacatgcttcaccttccattcgagatagaggt
gcactgatgtcattatctagccaggcctctgctccctctaatctacctggttatggaact
tctgctattgttgcgatggatagaagttcaagtatatcatcagggacatctatctcatct
ggcatacttctttcacaagctaagtcacttggtaagggtacagaacgtagtttggaaagc
atgttacatgcaagcaaacagaaggtttctgctattgaaagcatgcttagaggcttggat
ttgtctgataagcataattcatcttctctccggtcaacaagtttggatctaggagttgac
cctccatcatctcgtgatccacctttccctgctgctgtccccgcatctaatcatctgaca
agctctttaacagaatcaactacttctggcatcaataaaggtagtaaccgaaatggtggt
cttggtttgtctgacataatcactcagattcaagcttcgaaagattcggccaagttatcc
tatcgtagcaatgttggtatcgagcctttatcatcattatcatcatattcgagtaaaagg
gcatctgacagacaagaaagaagttctcttgatgataacaatgatatgagggagactagg
cgatatatgaaccccaacactgataggcagtatttggatgccccttatagagatggaaac
tttagggaatctcataatagttatgtgcctaatttccagagaccactattgagaaagaat
gtggctggacgcatgtctgctagcaggaggaggagttttgatgataatcagctatctctt
ggagagatgtcaaattttgcagatggaccagcatctcttcatgaagctttgagtgaagga
cttagttcaggttccaattggtctgctagggttgctgcctttaattatcttcattctttg
ttgcagcaaggtccaaagggaactctagaagttgttcagaattttgagaaggtaatgaag
ttgtttttccagcacttggatgatccccatcataaagttgcacaggctgctctttcaaca
cttgcagatattgttccagtatgccgaaagccatttgagggttacatggaaagaatatta
ccccatgtgttttctcggttaattgaccctaaagaacttgtcaggcagccatgttcaaca
actctggaagttgtcagcaaaacttacagtatagattctctcttacctgcattattacgc
tcactagatgaacaaaggtctccaaaggctaaattggctgttattgaatttgctatcaat
tcctttaacaaacatgctatgaatccagaaggtgctgcgaatattggcatcctaaaatta
tggcttgctaagttaacccctttggtcaatgacaaaaatacaaagcttaaagaagcagct
attacctgcattatatcagtgtactctcactttgattcgactgctgttcttaatttcatt
ctgagtttgtcagttgaagaacaaaattccttgagacgagcattgaaacaatacacccct
cgcattgaagtagacctaataaactatctgcaaaacaagaaagagaaacaacgttctaag
tcttcctatgatccatctgatgttgtgggaacatcctctgaagatggatatgttggttac
tctaggaaagctcattaccttggtaagtattctgctggttcccttgatggtgatggtggc
aggaaatggagttcccaagattcaacactgataaaagccagtcttggtcaagcatcttct
ggtgaaactcgggaacatctgtatcataattttgagactgatcctaacagtggtagtctt
ggttcaaaaactaaggatcttgcttatgcagtcaatccgatgggtcaaaacattggctct
caaactagccaacatggacatgtggacagtagcgtgagcttagagggtctttccattcct
cgtctagatgtaaacggtttgatgccatcagagcatttaaatggtactgaaggctatgta
aatgacaaagagcatccttctgaattggaacgtaatcatcactcagctgaagatgtaaag
attaactctatgacagacacaggacccagcattcctcaaattcttcatatgatatgcagt
gggggtgatggaagccctatttcaagtaaacggactgctcttcaacaattggttgaagct
tctataacaaatgatcattctgtttggaccaagtacttcaatcagattttgacagtagtg
cttgaggtgctggatgattcagattcctcagtcaaagagcttgctctttcactgatagtt
gaaatgcttaaaaaccagaaaggtgccgtggagaattctgttgagattgtaattgagaag
ctgcttcatgttacaaaagatatcattcctaaggtctcgaatgaagcagagcactgcctg
accattgttttatctcagtatgatccattcagatgtttaagtgtcattgtccctctactg
gttactgaggatgagaaaacgctcgttatttgcataaattgcttaacaaagcttgtgggg
cggctttctcaggaggaactgatgactcagttaccctcgtttctgcctgctcttttcgaa
gcttttggtaaccagagtacagatgttcggaagaccgttgttttctgtctcgtggatatt
tatatcatgcttgggaaagcattcttgccatatttgcaagggcttaacagcacacagttg
aagttggtcaccatttatgcaaatcgaatctcacaagccaggacaggcaaagcaattgat
gccgttcaagactag
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