Glycine max (soybean): 100820546
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Entry
100820546 CDS
T01710
Name
(RefSeq) chaperonin CPN60-2, mitochondrial
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
gmx
Glycine max (soybean)
Pathway
gmx03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gmx00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
100820546
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gmx03019
]
100820546
03110 Chaperones and folding catalysts [BR:
gmx03110
]
100820546
03029 Mitochondrial biogenesis [BR:
gmx03029
]
100820546
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
gmx04147
]
100820546
Enzymes [BR:
gmx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
100820546
Messenger RNA biogenesis [BR:
gmx03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
100820546
Chaperones and folding catalysts [BR:
gmx03110
]
Heat shock proteins
HSP60 / Chaperonin
100820546
Mitochondrial biogenesis [BR:
gmx03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
100820546
Exosome [BR:
gmx04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
100820546
Exosomal proteins of other body fluids (saliva and urine)
100820546
Exosomal proteins of breast cancer cells
100820546
Exosomal proteins of colorectal cancer cells
100820546
Exosomal proteins of bladder cancer cells
100820546
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
ChlI
Motif
Other DBs
NCBI-GeneID:
100820546
NCBI-ProteinID:
XP_003556325
UniProt:
I1NHW4
LinkDB
All DBs
Position
20:43424878..43429460
Genome browser
AA seq
575 aa
AA seq
DB search
MYRFATSLASKARIARSSTQQIGSRVTWNRNYAAKDIKFGVEARALMLKGVEELADAVKV
TMGPKGRNVVIEQSFGAPKVTKDGVTVAKSIEFKDKVKNIGASLVKQVANATNDVAGDGT
TCATILTKAIFTEGCKSVAAGMNAMDLRRGINMAVDAVVTNLKSRARMISTSEEIAQVGT
ISANGEREIGELIAKAMEKVGKEGVITISDGKTLYNELEVVEGMKLDRGYISPYFITNQK
NQKCELEDPLIIIHEKKISSINAIVKVLELALKRQRSLLIVAEDVESDALATLILNKLRA
GIKVCAIKAPGFGENRKSGLQDLAVLTGGQLITEELGLNLEKVDLDLFGSCKKITISKDD
TVILDGAGDKKAIEERCEQIRSAIENSTSDYDKEKLQERLAKLSGGVAVLKIGGASEAEV
GEKKDRVTDALNATKAAVEEGIVPGGGVALLYASSELDKLQTANFDQKIGVQIIQNALKT
PVHTIASNAGVEGAVVVGKLLEQNDPDLGYDAAKGEYVDMVKTGIIDPLKVIRTALVDAA
SVSSLMTTTEAVVSELPKDDKDVPAMGGGMGGMDY
NT seq
1728 nt
NT seq
+upstream
nt +downstream
nt
atgtaccgctttgcaacctccctcgcctccaaagctagaattgccaggagcagcactcaa
cagattggaagtagggtcacttggaacaggaattatgcggccaaagacattaagtttggt
gtggaggctcgggctctgatgcttaagggtgtcgaagagctcgctgatgccgttaaagta
acaatgggccctaaggggcgtaatgtggttattgagcaaagttttggagcacctaaagtg
acgaaagatggagtaaccgttgctaagagcattgaattcaaggacaaagtcaagaatatc
ggtgccagtcttgtaaagcaggttgctaatgctactaatgacgtggctggtgatggaacc
acttgtgctacaattcttactaaagcaatatttacggaaggatgtaaatcagttgcagct
ggaatgaatgcgatggacctgagacgaggtataaatatggctgttgatgctgtggtgaca
aatctgaaaagcagagcacgtatgattagcacttctgaagaaattgcccaggttggaaca
atatctgccaatggggagagggaaattggtgagttaattgcaaaagctatggagaaagtt
ggcaaagagggtgtcatcacaatctcagatggcaagacattgtacaatgagttggaagtc
gttgaaggaatgaagctcgacaggggatacatttctccatatttcataacaaaccagaag
aaccagaaatgtgaacttgaggatcctctcattataatccatgaaaagaaaatctcaagc
ataaatgctatcgttaaagtattagagttagctttgaagagacaaagatctttattgatt
gtcgccgaggatgtggaaagtgatgcccttgcaactcttattctaaataaacttcgtgct
ggaatcaaggtatgtgccatcaaagctcctggttttggtgaaaaccgtaaatctggtctc
caggatcttgctgttcttacaggaggtcaacttatcaccgaagagcttggtttgaatctt
gaaaaagtagacctggacttatttggctcttgcaagaagataacaatttctaaagatgac
actgtcatccttgatggagctggtgataagaaagcaattgaggaaagatgtgagcagatt
agatcagcaattgaaaatagcacttcagattatgacaaggaaaagttacaggaaagatta
gccaagctttctgggggtgttgcagtactgaagattggaggagccagtgaggctgaagtt
ggtgagaagaaggatagagtgacagatgccttaaatgcaaccaaggcagctgtagaggag
ggcatagtacctggtggtggtgttgctcttctttatgcatcgagtgagttggataagctt
caaactgccaactttgatcaaaagataggtgtccagatcatccaaaatgctttgaagact
cctgtgcacacaattgcttcaaatgcaggagttgagggtgctgttgttgttggcaaacta
ttggaacagaatgatcctgatcttggatatgatgcagccaaaggtgaatatgttgatatg
gttaaaactggaattattgatccattgaaggttattaggaccgccttggttgatgcagcc
agtgtgtcatctttgatgacaacaactgaagctgttgtgtctgaactcccgaaggacgat
aaagatgttcctgccatgggtggtggcatgggtggcatggattattaa
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