Glycine max (soybean): 102668428
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Entry
102668428 CDS
T01710
Name
(RefSeq) splicing factor 1 isoform X1
KO
K13095
splicing factor 1
Organism
gmx
Glycine max (soybean)
Pathway
gmx03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
gmx00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
102668428
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
gmx03041
]
102668428
Spliceosome [BR:
gmx03041
]
Complex A
Other components
Complex A specific factors
102668428
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
KH-I_KHDC4-BBP
SF1-HH
KH_1
Motif
Other DBs
NCBI-GeneID:
102668428
NCBI-ProteinID:
XP_006601872
UniProt:
K7MP55
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Position
18:complement(115548..121053)
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AA seq
782 aa
AA seq
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MSAEIDSTCAPEPHKMSGQKLSIFSAKSGFVIPKNKLSGSLVPIFRGAKKHGVTVGATNE
ESSKQIERKSKWGPDLTQDAAVRRGKVLALQIRVDQITKQLESEKLEVGDTQNLNPDQSK
SGPRITSKKSEMLELEKREAIGEILKLDPSYKPPRGFKPLLKEASIPLPVQEYPGYNFVG
LIYGLEGDNQKQLEKETGAKIKIHGIKADTGEKGEIKPGTDIQCNYKEMHVNLSADSFEK
VDAAMSIIELLVTSVIGNLAAGSTPSISVSRYSTNVLSQSHECPPSHADSLSLENQAVLQ
PVAVTQMHGDNFQYSSPWFSVVPSHSPVFASSGSVALPNPLGLARTPHFPSHTSNMTSPF
GAQPGPAGFQPIIPNQHVSVQAPPPRQVLQYSHMTQTSPLGHIGPPRNPVQNLLTPTNAS
LSFPVTLSQPTPIGQHQTSVSSMHLPMSGISSSIPNQSLTHLGVSSGQNEAPVTVKMSVG
PSNMVPMASPVVPPARPVSLHQQPDVAFKPPQSNMSMMPRSATFPPHQVGISPGQPSSLR
PMPVPISANHLLGPVSFPSPGISPSLPLPQQAGIPNLAFGVAPYHTHVKPPVLGTSKSGN
FTFQSHLPNADYGQVYSGPNSQSGATQEPPSGPRPPPFGFAVPDQPRQIFPRTQFPGQVD
QAVAFGGRSGSISNSIPPPRHGVFPYAGQPAPRSSAAQMGMKNFISAPQIPNLTSAGSQR
GMPIRKSYATQMAWADISMPLNQKFVSNPPMASGKIAYATDQIYDPFSPTSAPPQHKGNP
GK
NT seq
2349 nt
NT seq
+upstream
nt +downstream
nt
atgagtgctgagattgattcaacttgtgctcctgaacctcacaaaatgtctggccaaaag
ctctctatattttctgccaaatctggatttgtcatccctaaaaacaaattgtcagggtca
ctggtccctattttccgaggggctaaaaagcatggggtcactgttggtgccaccaatgaa
gaaagttcaaaacaaattgagaggaaatcaaaatggggacctgatctcacacaagatgca
gctgtcaggaggggaaaagttttagctttgcagattcgagtggaccaaattacaaagcag
ttggaatcagaaaaactggaagttggggacactcagaacttgaatccagatcaaagcaaa
tctggccctcgaattaccagcaagaagtcagaaatgctcgaacttgaaaagcgggaagca
ataggtgaaatactaaaattagatcccagttacaagcctccacgtggttttaaaccattg
ttaaaagaagccagcattcctttgcctgtccaagaatatcctgggtacaattttgttggt
ctaatatatgggcttgaaggtgataatcaaaaacaacttgaaaaggaaactggtgcaaag
ataaaaattcatggaatcaaagcagacacaggagagaaaggtgaaattaaacctggaact
gatatccagtgcaattacaaagagatgcatgttaacctatcagctgatagttttgaaaaa
gtggatgctgcaatgtcaatcattgaactgctagttacctctgtaattgggaatttagct
gctggttctactccctctatatcagtttctaggtacagcactaatgttctgagtcaaagc
cacgaatgccccccttctcatgcagattctctatctctggaaaaccaggctgtgttgcaa
ccagtagctgttacacaaatgcatggtgataacttccaatactctagtccatggttttca
gtggttccatctcattcccctgtgtttgcttcgtctggcagtgtagccctcccaaatcca
ttaggtcttgctagaactccccattttccatcacacacttcaaacatgacttcgcctttt
ggtgctcaacctggacctgctggatttcagccgattattccaaatcaacatgtttctgtg
caagcaccaccaccaagacaggttttacagtattcacatatgactcagacaagtcctttg
ggtcacattgggcccccaagaaaccctgtacagaatttgttaactccaacaaatgcttca
ctttcatttcctgttactttaagccaaccaacgccaataggacaacatcagacatctgtg
tcttcaatgcatctacctatgtctggtatatcgtcatcaatacctaaccagtcattgacc
catctaggggtctcttctggccagaacgaagcccctgtcactgttaaaatgtctgttggt
cccagcaatatggtgccaatggcttcaccagtggttccacctgcaagacctgtttctcta
catcaacagccagatgttgcatttaagccaccacagtcaaatatgtcaatgatgccacga
tctgccacctttcctccacatcaagtaggaatatcccctggacaaccatcttctttgaga
ccaatgcctgtaccaatatctgcaaaccatttattgggacctgtttcatttccttcacct
ggaatatccccttcacttccattgcctcagcaagcaggaatacctaatcttgcttttgga
gttgctccttatcacacccatgtaaaaccaccagtcttggggacatcaaaatctggaaat
tttacttttcaatcacatctgcccaatgcagactatggtcaagtctattctggaccaaac
agtcaatcaggtgctacacaagaaccaccttctggtccacgacctccaccatttggtttt
gctgtgcctgatcagcctcgtcaaatctttccaaggacacaattccctggtcaagtggat
caagccgttgcctttgggggaagatcaggttccatctcgaactcaattccaccacccaga
catggtgtgtttccatatgctggtcaacctgcacctagatcatcagccgcacaaatgggt
atgaagaacttcatttctgccccacaaattccaaatttgaccagtgctggttcccaaaga
ggcatgcctattcgaaaaagctatgctactcagatggcatgggcagatatctcaatgcct
ctgaatcaaaagtttgtcagcaatccccccatggcttctggtaagattgcatatgctaca
gaccaaatttatgatcccttttcacccacttctgcacctccacaacacaaaggtaatcct
ggaaaatga
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