Glycine max (soybean): 3989329
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Entry
3989329 CDS
T01710
Symbol
rpoA, GlmaCp053
Name
(RefSeq) RNA polymerase alpha subunit
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
gmx
Glycine max (soybean)
Pathway
gmx03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
gmx00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
3989329 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gmx03021
]
3989329 (rpoA)
03400 DNA repair and recombination proteins [BR:
gmx03400
]
3989329 (rpoA)
Enzymes [BR:
gmx01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
3989329 (rpoA)
Transcription machinery [BR:
gmx03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
3989329 (rpoA)
DNA repair and recombination proteins [BR:
gmx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
3989329 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
Motif
Other DBs
NCBI-GeneID:
3989329
NCBI-ProteinID:
YP_538797
UniProt:
Q2PMQ3
A0A898CTU0
LinkDB
All DBs
Position
Pltd:complement(76584..77585)
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AA seq
333 aa
AA seq
DB search
MVREKIRVSTRTLQWKCVESRIDSKRLYYGRFILSPLMKGQADTIGIAMRRVLLGEIEGT
CITRVKSEKIPHEYSTIIGIEESVHEILMNLKEIVLRSNLYGTRDASICFKGPGYVTAQD
IILPPSVEIVDNTQHIANVTEPVNLCIELKIERNRGYRIKTLKNFQDGSYPIDATFMPVR
NVNHSIHSYVNGNEKQEILFLEIWTNGSLTPKEALYEASRNLIDLFIPFLHAEEDNFNLE
NNQHKVTLPLFTFHDILAKEKLRKKKKEIALKSIFIDQLELPPRIYNCLKRSNIHTLLEL
LNNSQEDLLKIEHFRVEDVKYILDFLEIEKHFA
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
atggttcgagagaaaataagagtatctactcggacactacaatggaaatgtgttgaatca
agaatagacagtaaacgtctttattatggacgctttattctgtctccacttatgaaaggt
caagccgatacaataggcattgcaatgcgaagagttttactcggagaaatagagggaaca
tgtatcacacgtgtaaaatcagaaaaaataccacatgaatattctaccataataggtatt
gaagaatcagtacatgaaattttaatgaatttgaaagaaattgtattgagaagtaatctg
tatggaactcgggacgcgtctatttgtttcaaaggtcctggatatgtaaccgctcaagac
atcattttaccaccctctgtggaaatcgttgataatacacaacatatagccaacgtaaca
gaacccgttaatttgtgtattgaattaaaaattgagaggaatcgtgggtatcgtataaaa
acactaaaaaactttcaagatggaagttatcctatagatgccacatttatgcctgttcga
aatgtaaatcatagtattcattcttatgtgaatgggaatgaaaaacaagagatactcttt
ctcgaaatatggacaaatggaagtttaactcctaaggaagcgctttatgaagcctcccgg
aatttgattgatttatttattccctttttacacgcagaagaagataactttaatttagaa
aacaatcaacacaaagttactttgcccctttttacttttcatgatatattggctaaggaa
aaactaaggaaaaagaaaaaagaaatagcattgaaatccatttttattgaccaattagaa
ttgcctcccaggatctataattgtctcaaaagatccaatattcatacattattagaactt
ttgaataacagtcaagaagaccttctgaaaattgaacattttcgcgtagaagatgtcaaa
tatatattggactttttagaaatagaaaagcattttgcataa
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