Glycine max (soybean): 547805
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Entry
547805 CDS
T01710
Symbol
TBP1
Name
(RefSeq) TATA-box-binding protein
KO
K03120
transcription initiation factor TFIID TATA-box-binding protein
Organism
gmx
Glycine max (soybean)
Pathway
gmx03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
gmx00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
547805 (TBP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gmx03000
]
547805 (TBP1)
03021 Transcription machinery [BR:
gmx03021
]
547805 (TBP1)
Transcription factors [BR:
gmx03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
TATA-binding proteins
547805 (TBP1)
Transcription machinery [BR:
gmx03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
547805 (TBP1)
RNA polymerase III system
TFIIIB
547805 (TBP1)
RNA polymerase I system
SL1/TIF-1B
547805 (TBP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TBP
DUF3378
DUF4295
Motif
Other DBs
NCBI-GeneID:
547805
NCBI-ProteinID:
NP_001238202
UniProt:
Q42808
A0A0R0FQI0
LinkDB
All DBs
Position
16:complement(29965252..29969648)
Genome browser
AA seq
200 aa
AA seq
DB search
MADQGLEGSQPVDLQKHPSGIVPTLQNIVSTVNLDCKLDLKTIALQARNAEYNPKRFAAV
IMRIRDPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVG
SCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVRDE
TYTAFENIYPVLTEFRKNQQ
NT seq
603 nt
NT seq
+upstream
nt +downstream
nt
atggctgaccaaggattggaagggagccagccggtggatctacagaagcatccttctggg
atcgtgcctacccttcaaaatattgtgtccacagtcaatttggactgtaagttggacctc
aaaacaattgcacttcaagctcgtaatgcagagtacaatcccaagcgttttgctgctgtc
attatgaggataagagatcccaaaacaactgcacttatttttgcttctggcaagatggtt
tgtactggagctaagagtgaacaacagtctaaattggcagcaaggaagtatgctcgtatt
atccaaaagcttggcttcccagccaaatttaaggatttcaaaattcagaacattgtcggc
tcttgtgatgtcaagttccccatacggctggagggtcttgcatattcccatggtgctttc
tcaagttatgaaccagagctgtttccagggctaatctaccgtatgaagcaacctaaaata
gttttgcttatatttgtctctggaaaaattgttctaacaggagccaaggtgagagatgag
acttacactgcctttgaaaacatatatcccgtgcttactgagttcaggaaaaaccaacaa
tga
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integrated database retrieval system
