Glycine max (soybean): 547810
Help
Entry
547810 CDS
T01710
Symbol
PHYA
Name
(RefSeq) phytochrome A
KO
K12120
phytochrome A
Organism
gmx
Glycine max (soybean)
Pathway
gmx04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
gmx00001
]
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
547810 (PHYA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PHY
PAS
PAS_2
GAF
HATPase_c
HisKA
PAS_9
PAS_4
Yop-YscD_ppl_3rd
Motif
Other DBs
NCBI-GeneID:
547810
NCBI-ProteinID:
NP_001238286
UniProt:
P42500
B5U9F5
LinkDB
All DBs
Position
10:37647365..37653325
Genome browser
AA seq
1130 aa
AA seq
DB search
MSTSRPSQSSSNSRRSRHSARMAQATVDAKIHATFEESGSSFDYSSSVRVSGTADGVNQP
RSDKVTTAYLNHMQRGKMIQPFGCLLAIDEKTCKVIAYSENAPEMLTMVSHAVPSVGDHP
ALGIGTDIKTLFTAPSVSGLQKALGCADVSLLNPILVHCKTSGKPFYAIVHRVTGSLIVD
FEPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGNMERLCDTMVQEVFELTGYDRVMA
YKFHEDDHGEVIAEITKPGLEPYLGLHYPATDIPQASRFLFRKNKVRMIVDCHAKHVRVL
QDEKLQFDLILCGSTLRAPHSCHAQYMANMDSIASLVLAVVVNDNEEDGDTDAVQPQKRE
RLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAVHVHKEIELEYQIIEKNILRTQALLCML
MRDAPLGIVSESPNIMDLVKCDGAALIYRNKVWRLGVTPSEPQIREIALWLSEYHMDSTG
FSTDSLFDAGFPSALSLGDVVCGMASVRVTAKDMVFWFRSHTAAEIRWGGAKHEAGEKDD
SRRMHPRSSFKAFLEVVKARSLPWKEYEMDAIHSLQIILRNAFKEDTESLDLNAKAINTR
LSDLKIEGINDLKIERMQELEAVTSEIVRLIDTATVPILAVDVDGLVNGWNIKIAELTGL
PIGEATGKHLLTLVEDSSTDRVKKMLNLALLGEEEKNVQFEIKTHGSKMDSGPISLVVNA
CASRDLRDNVVGVCFVAHDITAQKNVMDKFIRIEGDYKAIVQNRNPLIPPIFGTDEFGWC
CEWNPAMMKLTGWKREEVMDKMLLGEIFGTQMAACRLKNQEAFVNLGVVLNKAMTGSETE
KVPFGFFARNGKYVECLLSVSKKLDVEGLVTGVFCFLQLASPELQQALHIQRLSEQTASK
RLNALSYMKRQIRNPLCGIVFSRKMLEGTDLGTEQKQLLRTSAQCQQQLSKILDDSDLDT
IIDGYLDLEMAEFTLHEVLVTSLSQVMTKSNGKSIRIVNDVAGHIMMETLYGDSLRLQQV
LADFLLISINFTPNGGQVVVAGSLTKEQLGKSVHLVKLELSITHGGSGVPEVLLNQMFGN
NGLESEEGISLLISRKLLKLMNGDVRYLREAGKSAFILSAELAAAHNLKA
NT seq
3393 nt
NT seq
+upstream
nt +downstream
nt
atgtctacctcaaggcctagccaatcatccagcaattcaaggagatcaagacatagtgct
agaatggctcaggcaactgtagatgcaaaaatccatgcaacttttgaggagtccggtagt
tcctttgattactccagttcggtgcgtgtctctggtacagctgatggagtcaatcaacca
aggtctgacaaagttacaacagcttacctcaatcacatgcagagaggcaagatgattcag
cctttcggttgcttgttggccattgatgagaaaacatgtaaggtcattgcatacagtgag
aacgcgcccgaaatgctgaccatggttagccatgctgtccccagtgttggtgaccaccct
gcccttggcattggcactgacataaaaactctattcactgcaccaagtgtttctggattg
cagaaggctctaggatgtgcggacgtttcgcttcttaaccccatacttgtccattgcaag
acctctgggaagcccttttatgcaattgtccatcgcgtcactggtagtttgatcgttgac
tttgagccagtcaagccttatgaagttcccatgactgcagcaggtgccttgcaatcttac
aagcttgctgccaaagcaattacccgattgcaatcattgcctagtgggaacatggaaaga
ctatgtgatactatggttcaggaagtttttgaactcacaggttatgatagggtgatggct
tataaatttcatgaggatgatcatggagaggtgattgctgagataacaaagcccggtctt
gagccatatctgggtttgcactatccagccaccgacattccccaggcttcacgcttttta
tttaggaagaacaaggttcgtatgatagttgactgtcatgcaaaacacgtgagggttctt
caagatgaaaaactccaatttgatttgattttgtgtggttccaccttaagagctcctcat
agttgccacgcgcagtacatggctaacatggattcaattgcttccctggttttggcagtt
gtagtcaatgacaacgaagaagatggggacactgatgctgttcagccacaaaagagggag
agactttggggtttggtagtttgccataacactactcccaggtttgttccctttcctcta
aggtatgcttgtgaatttctggctcaagtatttgccgtccatgtgcacaaagaaatagag
ttagaatatcagattattgagaagaatatcctgcgcacccaggcactcttgtgtatgctg
atgcgagatgcacccctaggaattgtatcagagagtcctaatataatggatctagttaaa
tgtgatggagctgccctcatatacaggaacaaagtatggagattaggagtgacaccaagt
gaaccccagataagagagatagctttgtggttgtctgagtaccatatggattccacaggc
tttagtacagatagcttgtttgatgcagggttcccatcggctctttctctgggtgatgtt
gtgtgtggaatggcatctgttagagtaactgcaaaagacatggtattttggtttcggtca
cacactgctgcagaaatccgatggggtggtgcaaagcatgaggctggagaaaaagatgat
agtaggaggatgcatccaagatcatcattcaaggctttccttgaagttgtgaaggcaagg
agtttaccttggaaggaatatgaaatggatgctattcattccttgcagataatactgaga
aatgcattcaaagaagataccgagagtttggatttaaacgcaaaagcaattaatacaaga
ctaagtgatttgaagattgaagggataaacgatttgaagattgaaaggatgcaggaactg
gaagcagtgacaagtgagatcgttaggttgattgacacagcaacagtgcctattttggcc
gttgatgttgatgggctggtcaatgggtggaacataaaaattgctgagttgacgggtctt
ccaattggtgaagctactggaaagcatttactcacacttgttgaggattcttcaactgat
agagtcaagaagatgcttaacttagcactgctaggtgaagaagagaagaatgtccaattt
gagatcaaaacacatgggtctaagatggattctggtcctattagtttggtagtaaatgct
tgcgcgagcagggatcttcgagataatgttgtcggggtttgttttgtggcccatgatata
actgctcagaagaatgtcatggacaaattcatccgtattgaaggtgattacaaggcaatt
gtacagaaccgcaatccattaatccctcctatatttggcacagatgaatttggctggtgt
tgtgagtggaatccagctatgatgaagttaactggatggaagcgagaggaggtgatggat
aaaatgcttttgggagagatttttggcacccagatggctgcttgtcgcctaaagaatcaa
gaagcttttgttaatttgggcgtcgtacttaataaagccatgactggttcagaaacagag
aaggttccttttggtttctttgctcggaatggcaagtatgtagaatgcctgctttctgtg
agtaagaaattggacgtagagggcctagttactggggtcttctgcttcttacagctagct
agcccagagctccaacaagcattacatattcagcgtctatctgagcaaactgcttcgaag
agattgaatgcattaagttacatgaaaaggcagatcaggaatcctttgtgtggaattgta
ttttcccggaaaatgttggagggtactgacttgggaacagaacagaaacaacttctgcgc
actagtgctcagtgccagcagcagcttagtaaaattcttgatgactcagatcttgacacc
atcatagatggttacttggatcttgagatggctgagttcaccctgcatgaagttctggtt
acctcccttagtcaagtcatgacaaaaagtaatggaaagagtatccgaatagtcaatgat
gttgcagggcatattatgatggaaactttatatggtgatagtcttaggcttcagcaggtc
ttggctgactttttacttatttccatcaatttcactccaaatggaggtcaggttgttgta
gcaggctctctaaccaaagaacagttaggcaaatctgtccatcttgttaagttagagctc
agcataacacatggtgggagtggggtaccagaagtgttactgaatcagatgttcggaaac
aatgggctagaatccgaggagggtattagcctactgataagcagaaagctgctgaagctg
atgaatggagatgttcgctatctaagggaagcaggcaaatcagcttttatcctctctgct
gaacttgctgcagcccataatttgaaagcttaa
DBGET
integrated database retrieval system
