Glycine max (soybean): 547986
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Entry
547986 CDS
T01710
Name
(RefSeq) clathrin heavy chain
KO
K04646
clathrin heavy chain
Organism
gmx
Glycine max (soybean)
Pathway
gmx04142
Lysosome
gmx04144
Endocytosis
gmx05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
gmx00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
547986
04142 Lysosome
547986
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
547986
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gmx04131
]
547986
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
gmx04147
]
547986
Membrane trafficking [BR:
gmx04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
547986
Exosome [BR:
gmx04147
]
Exosomal proteins
Proteins found in most exosomes
547986
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Clathrin
Clathrin_propel
Clathrin_H_link
Clathrin-link
TPR_COPA_B
Motif
Other DBs
NCBI-GeneID:
547986
NCBI-ProteinID:
XP_025982516
LinkDB
All DBs
Position
18:complement(1930379..1942865)
Genome browser
AA seq
1700 aa
AA seq
DB search
MAAANAPIAMREALTLPSIGINPQFITFTHVTMESDKYICVRETAPQNSVVIIDMNMPNQ
PLRRPITADSALMNPNSRILALKAQLQGTTQDHLQIFNIEMKAKMKSYQMPEQVVFWKWI
TPKLLGLVTQTSVYHWSIEGDSEPVKMFERTANLANNQIINYRCDPSEKWLVLIGIAPGS
PERPQLVKGNMQLFSVDQQRSQALEAHAASFAQFKVPGNENPSTLISFATKTLNAGQIIS
KLHVIELGAQPGKPSFTKKQADLFFPPDFADDFPVAMQISHKYSLIYVITKLGLLFVYDL
ETATAVYRNRISPDPIFLTSEATSVGGFYAINRRGQVLLATVNEQTIVNFVSGQLNNLEL
AVNLAKRGNLPGAEKLVVERFHELFAQTKYKEAAELAAESPQGILRTPDTVAKFQSVPVQ
AGQTPPLLQYFGTLLTRGKLNAFESLELSRLVVNQNKKNLLENWLAEDKLECSEELGDLV
KTVDNDLALKIYIKARATPKVVAAFAERREFDKILIYSKQVGYTPDYLFLLQTILRTDPQ
GAVNFALMMSQMEGGCPVDYNTITDLFLQRNLIREATAFLLDVLKPNLPEHGYLQTKVLE
INLVTFPNVADAILANGMFSHYDRPRIAQLCEKAGLYVRALQHYTELPDIKRVIVNTHAI
EPQSLVEFFGTLSREWALECMKDLLLVNLRGNLQIIVQVAKEYCEQLGVDACIKLFEQFR
SYEGLYFFLGSYLSSSEDPDIHFKYIEAAAKTGQIKEVERVTRESSFYDPEKTKNFLMEA
KLPDARPLINVCDRFGFVPDLTHYLYTNNMLRYIEGYVQKVNPGNAPLVVGQLLDDECPE
DFIKGLILSVRSLLPVEPLVEECEKRNRLRLLTQFLEHLVSEGSQDVHVHNALGKIIIDS
NNNPEHFLTTNPYYDSRVVGKYCEKRDPTLAVVAYRRGQCDDELINVTNKNSLFKLQARY
VVERMDGDLWEKVLNPDNAYRRQLIDQVVSTALPESKSPEQVSAAVKAFMTADLPHELIE
LLEKIVLQNSAFSGNFNLQNLLILTAIKADPSRVMDYINRLDNFDGPAVGEMAVEAQLYE
EAFAIFKKFNLNVQAVNVLLDHIHSIDRAVEFAFRVEEDAVWSQVAKAQLREGLVSDAIE
SFIRADDATQFLDVIRAAEDGNAYHDLVRYLLMVRHKTKEPKVDSELIYAYAKIDRLSDI
EEFILMPNVANLQNVGDRLYDEELYEAAKIIFAFISNWAKLAVTLVKLKQFQGAVDAARK
ANSAKTWKEVCFACVDAEEFRLAQICGLNIIIQVDDLEEVSEYYQNRGCFNELISLMESG
LGLERAHMGIFTELGVLYARYRHEKLMEHIKLFATRLNIPKLIRACDEQQHWKELTYLYI
QYDEFDNAATTIMNHSPEAWDHMQFKDVVVKVANVELYYKAVHFYLQEHPDLINDVLNVL
ALRVDHARVVDIMRKAGHLRLVKPYMVAVQSNNVSAVNEALNEIYVEEEDYDRLRESIDL
HDNFDQIGLAQKIEKHELLEMRRVAAYIYKKAGRWKQSIALSKKDNLYKDAMETASQSGD
RELAEELLVYFIDQGKKECFASCLFVCYDLIRADIALELAWMNNMIDFAFPYLLQFIREY
TGKVDELVKDKIEAQNQVKAKEQEEKEVIAQQNMYAQLLPLALPAPPMPGMGGGFAPPPP
MGGLGMPPMPPFGMPPMGSY
NT seq
5103 nt
NT seq
+upstream
nt +downstream
nt
atggcggctgccaacgctccgatcgccatgagagaagctctcaccttgccaagcattggc
ataaatccgcagttcatcactttcacgcatgtgacgatggagtccgataagtatatatgc
gttcgagaaacggctccgcagaatagtgtggttatcattgatatgaacatgccgaatcag
cctttgaggaggcctattacggcagattccgctcttatgaatccaaattccagaatcctt
gctttgaaagctcaactccaaggaacaactcaagatcacctacaaatttttaacattgaa
atgaaagcaaagatgaaatcttatcagatgcccgagcaggtggtcttttggaagtggatt
acccccaagttgttgggtcttgtaacacagacctctgtataccattggtcaattgaaggt
gactctgaacctgtaaagatgtttgagagaacagcaaatttggcaaacaatcaaataatt
aattatagatgtgatccttctgagaaatggttggtcttgattggtattgctccaggttcc
cctgagaggccacaattggttaaaggaaacatgcaactcttctctgtggatcaacagcgg
agccaggctcttgaagcacatgcggcatcatttgctcaattcaaagttcctgggaatgaa
aatccttctactttgatttcttttgccactaaaacacttaatgctggccaaattatatcc
aagttgcatgttattgagctgggtgcacaaccagggaagccatcatttacaaagaaacaa
gcagatcttttctttcccccagattttgctgatgattttccagttgccatgcagatatcc
cacaaatacagtttgatttatgtgataacgaaacttggtctcctatttgtctacgatttg
gagacagctacagctgtatataggaacagaattagtccagatcctatatttttgacatca
gaagctacatctgttggaggcttttatgccattaataggagaggccaggtgttgttggct
actgttaatgagcaaacgatcgtgaattttgtcagtggtcagttaaacaatttggagcta
gcagttaatcttgccaagcgaggaaatcttcctggtgctgagaaactggtggtagaacgt
ttccatgaactgtttgcccaaacaaagtataaagaagcagctgaacttgctgctgagtct
ccgcaaggaatccttcgcacacctgatacagttgccaaatttcagagtgttcctgtgcaa
gctgggcaaactcctccactattgcagtattttggaacacttctaacaagaggaaagctg
aatgcctttgagtcattggaattgtcaaggctggttgtgaaccagaacaagaaaaatctt
ttggagaattggttggcggaggataagcttgaatgcagtgaggagctaggagatcttgta
aagactgtggacaatgatcttgctttaaaaatatacatcaaagccagagctactccaaaa
gttgttgctgcttttgctgagagaagggagtttgacaagattctaatatactctaagcag
gttgggtacacacctgactatctcttccttttgcaaacaattctccggacagatcctcag
ggtgctgttaattttgcattaatgatgtcgcaaatggagggaggttgcccagttgattac
aacaccataactgatctgtttcttcagagaaatctgatccgtgaggcaacagcctttctg
ctagatgttctgaaaccaaatctaccagaacatgggtaccttcaaacaaaggtgttggag
ataaatctggttactttcccaaatgttgctgatgcaattttggctaatggaatgttcagc
cattatgaccgtcctcgtattgctcaactttgtgaaaaagctggtctttatgtgcgagct
ttgcaacattacacagagttgccagatataaaacgtgtgattgtaaatacacatgcaatt
gagccacagtcactcgttgaattttttggtactctgtcaagagaatgggcattagagtgt
atgaaagacctattgctggtcaatcttagaggcaacctacagattattgtgcaggttgct
aaagaatattgtgaacaattgggcgttgatgcttgcataaagctttttgagcagttcagg
tcatatgaagggctgtattttttcctgggatcatatttgagctccagtgaggatcctgac
attcacttcaagtacattgaggcagcagcaaagactggacaaatcaaagaggttgagcgt
gtgactagagaatcaagtttttatgatcctgagaaaacaaagaactttctaatggaagct
aagcttccagatgcacgacctctgattaatgtttgtgaccgatttggatttgttccggat
ctaacacactatctatacacaaacaacatgcttcgttacattgaaggttatgttcagaag
gtgaacccagggaatgctcctttagtcgttgggcagcttttagatgatgaatgtccagaa
gattttatcaaaggcttgattctctctgttcgttccttactgccagtggagccccttgtg
gaggagtgtgagaagaggaatcggcttcgtttgcttacacagtttttggaacatcttgta
agtgagggaagccaggatgtacatgttcacaatgcactgggtaaaatcatcattgatagc
aacaacaatccggaacattttctcactaccaacccatactatgattctcgggttgtgggc
aaatattgtgagaaacgtgatcccaccttggcagttgtagcttataggcggggacaatgt
gatgacgagcttatcaatgtgacaaacaaaaattctttgttcaaactgcaagcaagatat
gttgttgagaggatggatggtgatctttgggagaaagttcttaaccctgataatgcctac
agaaggcaacttattgatcaggttgtatctacagctcttcctgaaagcaagagccctgaa
caagtatctgcagctgttaaggctttcatgactgctgatctacctcacgaattgattgag
cttcttgagaagattgtgcttcagaattctgcattcagtgggaactttaatcttcagaat
ctgcttattttaacagcaataaaggctgatccgtccagagttatggattatattaataga
ctggataattttgatgggccagcagttggagaaatggctgttgaggctcaattatatgag
gaagcatttgcaattttcaagaagttcaacttaaatgtccaagcagtcaatgtcttgcta
gatcatattcatagcattgatagagctgtggagtttgctttccgagttgaagaagatgct
gtttggagtcaggtagccaaggctcaactaagggaagggctagtaagtgatgccattgag
tcctttatacgagcagacgatgccacacagtttttggatgttatccgtgctgctgaagat
ggaaatgcttaccatgacttggtgagatacttgttgatggtaaggcataagacaaaagaa
cccaaggtggacagtgagctcatttacgcgtatgcaaagattgatcggctcagtgacatt
gaggagttcattcttatgccaaatgtagccaatcttcaaaatgttggtgaccgattatat
gatgaagaactatatgaggctgctaaaatcatatttgcttttatatctaactgggccaag
ttagcagttacacttgtgaagttgaaacaattccaaggtgcagttgatgcagcaaggaaa
gctaacagtgcaaaaacatggaaggaagtttgctttgcatgtgttgacgcggaggagttt
cgtttggcccagatatgtgggcttaatattattattcaggtggatgacttggaagaggtc
agtgaatattaccaaaatagaggttgcttcaatgagctaatatcgcttatggagagtggt
ttaggattagaacgggcacatatgggtatctttacagagttaggagttctgtatgctaga
tatcgtcatgagaagcttatggagcatatcaaactatttgcgacccgactcaatattcca
aaactcataagagcttgtgatgaacaacaacattggaaggagctgacatatttgtacatc
caatatgatgagttcgataatgctgcaacaaccatcatgaaccattcacctgaagcatgg
gatcacatgcaattcaaagatgttgttgtcaaagttgctaatgtagagttgtattacaag
gctgttcatttctatttacaagagcatccggatcttatcaatgatgttttgaatgtcctt
gcacttcgtgttgatcatgcacgtgttgttgacatcatgcgaaaggctggtcatctccgt
cttgtcaagccatacatggttgcagttcagagtaacaatgtgtctgctgttaatgaagcc
cttaatgaaatatatgttgaggaggaagactatgatagattgcgcgagtcgattgatttg
cacgataacttcgaccaaataggcctagcacagaagattgaaaagcatgagcttcttgag
atgagacgtgttgctgcttatatttacaagaaggcaggtagatggaagcagtccattgcc
ttgtcaaagaaggataacctttacaaagatgccatggagacagcctcgcaatctggtgac
cgtgaacttgctgaggagttgcttgtttatttcattgatcagggaaagaaagaatgcttt
gcctcgtgtctatttgtttgctatgatttgatccgggcagacattgctcttgaattggcc
tggatgaacaatatgattgactttgccttcccatatctcctgcagtttatccgtgagtac
accggcaaagttgatgaactggtgaaggataaaattgaagcgcagaaccaagtgaaggct
aaagaacaagaagagaaggaagtaattgctcaacagaatatgtatgctcagttgttgcct
cttgctttgcccgcaccaccaatgcctggaatgggaggaggctttgcgcctccccctcca
atgggtggattggggatgcctccaatgcctccttttggaatgccacccatgggcagctac
tga
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