Glycine max (soybean): 548070
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Entry
548070 CDS
T01710
Symbol
TFIIB1
Name
(RefSeq) transcription initiation factor IIB
KO
K03124
transcription initiation factor TFIIB
Organism
gmx
Glycine max (soybean)
Pathway
gmx03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
gmx00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
548070 (TFIIB1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gmx03021
]
548070 (TFIIB1)
Transcription machinery [BR:
gmx03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
548070 (TFIIB1)
Prokaryotic type
Archaeal type
TFB
548070 (TFIIB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Cyclin_N
Ribosomal_S27e
DUF7573
WHD_GDS1
Zn_ribbon_8
HTH_78
Motif
Other DBs
NCBI-GeneID:
548070
NCBI-ProteinID:
NP_001238343
UniProt:
P48513
A0A0R0I0L9
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All DBs
Position
10:complement(24445949..24450085)
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AA seq
313 aa
AA seq
DB search
MSDAFCSDCKRQTEVVFDHSAGDTVCSECGLVLESHSIDETSEWRTFANESGDNDPNRVG
GPSNPLLTDGGLSTVIAKPNGGGGGEFLSSSLGRWQNRGSNPDRALIQAFKTIATMSDRL
GLVATIKDRANEIYKRVEDQKSSRGRNQDALLAACLYIACRQEDKPRTVKEICSVANGAT
KKEIGRAKEYIVKQLGLENGNAVEMGTIHAGDFMRRFCSNLCMNNQAVKAAQEAVQKSEE
FDIRRSPISIAAAVIYIITQLSDDKKPLKDISLATGVAEGTIRNSYKDLYPHVSKIIPNW
YAKEEDLKNLCSP
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atgtcagacgcgttctgcagcgactgcaagaggcagacggaggtggtgttcgaccactcc
gccggcgacacggtgtgctcggagtgcggcctcgtcctcgaatcccactccatcgacgag
acctccgagtggcgcaccttcgccaacgagtccggcgacaacgaccccaaccgtgtcggt
gggccctccaatcccctcctcaccgacggaggcctctcgaccgtcatcgccaagcccaac
ggcggcggcggtggcgagttcctctcctcctccctcggccgctggcagaaccgcggctcc
aaccccgatcgcgccctcatccaagccttcaagaccatcgccaccatgtccgataggttg
ggactagttgcgaccatcaaggatcgggcaaatgagatatataagagggttgaagatcaa
aagtctagtagaggaagaaatcaagatgctttattggctgcttgtctctacatcgcttgc
cgacaagaagacaaacctcgtactgtaaaggaaatttgctctgttgccaatggggccaca
aagaaggaaattggccgagcaaaagaatacatagtaaaacaactgggtttggagaatggt
aatgctgtggagatgggtacaatacatgcaggggactttatgaggcgattctgttctaat
ctttgtatgaataatcaagctgttaaagctgctcaggaagctgtgcagaaatcagaagaa
tttgatataaggaggagtcccatatcaattgctgcagcagttatatacatcataactcag
ctttctgatgataagaagcctctcaaagatatatcacttgccacaggcgttgcagaagga
acaattaggaactcctacaaggatctttatcctcatgtttccaaaataataccaaattgg
tatgctaaggaggaggatttaaagaacctttgcagcccttga
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