Glycine max (soybean): 548092
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Entry
548092 CDS
T01710
Symbol
POLD1
Name
(RefSeq) DNA polymerase delta catalytic subunit
KO
K02327
DNA polymerase delta subunit 1 [EC:
2.7.7.7
]
Organism
gmx
Glycine max (soybean)
Pathway
gmx03030
DNA replication
gmx03410
Base excision repair
gmx03420
Nucleotide excision repair
gmx03430
Mismatch repair
gmx03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
gmx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
548092 (POLD1)
03410 Base excision repair
548092 (POLD1)
03420 Nucleotide excision repair
548092 (POLD1)
03430 Mismatch repair
548092 (POLD1)
03440 Homologous recombination
548092 (POLD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gmx03032
]
548092 (POLD1)
03400 DNA repair and recombination proteins [BR:
gmx03400
]
548092 (POLD1)
Enzymes [BR:
gmx01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
548092 (POLD1)
DNA replication proteins [BR:
gmx03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase delta complex
548092 (POLD1)
DNA repair and recombination proteins [BR:
gmx03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase delta complex
548092 (POLD1)
MMR (mismatch excision repair)
DNA polymerase delta complex
548092 (POLD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_B
DNA_pol_B_exo1
POL3_N
REV3_N
DNA_pol_B_2
divDNApol
Motif
Other DBs
NCBI-GeneID:
548092
NCBI-ProteinID:
NP_001238693
UniProt:
O48901
K7KLF0
LinkDB
All DBs
Position
4:47065774..47084598
Genome browser
AA seq
1088 aa
AA seq
DB search
MTQEEEFMDEDVFINETLVSEDEESLILRDIEQRQALANRLSKWTRPPLSAGYVAQSRSV
LFQQLEIDYVIAESHGELLPNSSGPVAIIRIFGVTKEGHSVCCNVHGFEPYFYICCPPGM
GPDDISHFHQTLEGRMREANRNSNVGKFVRRIEMVQRRSIMYYQQSNSQPFLKIVVALPT
MVASCRGILDRGIQLDGLGMKSFLTYESNVLFALRFMIDCNIVGGNWIGIPAGKYKKTAK
SLSYCQLEFDCLYSELISHAPEGEYSKMAPFRILSFDIECAGRKGHFPEPTHDPVIQIAN
LVTLQGEDQPFIRNVMTLKSCSPIVGVDVMPFETEREVLLAWRDFIREVDPDIIIGYNIC
KFDLPYLIERALNLKIAEFPILGRIRNSRVRVKDTTFSSRQYGTRESKEVAVEGRVTFDL
LQVMQRDYKLSSYSLNSVSSHFLSEQKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLP
QRLLDKLMFIYNYVEMARVTGVPISFLLSRGQSIKVLSQLLRRARQKNLVIPNAKQAGSE
QGTFEGATVLEARAGFYEKPIATLDFASLYPSIMMAYNLCYCTLVIPEDARKLNIPPESV
NRTPSGETFVKSNLQKGILPEILEELLTARKRAKADLKEAKDPLEKAVLDGRQLALKISA
NSVYGFTGATIGQLPCLEISSSVTSYGRQMIEHTKKLVEDKFTTLNGYEHNAEVIYGDTD
SVMVQFGVSAVEEAMNLGREAAEHISGTFTKPIKLEFEKVYYPYLLISKKRYAGLFWTKP
DNFDKMDTKGIETVRRDNCLLVKNLVNDCLHKILIDRDIPGAVQYVKNAISDLLMNRMDL
SLLVITKGLTKTGDDYEVKAAHVELAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYER
SEDPIYVLENNIPIDPHYYLENQISKPILRIFEPILKNASKELLHGSHTRSISISTPSNS
GILRFAKKQLPALVVKLYLARVITLSVHIAKEGRLSCTVKQYLKCLSWRCFLGGCGHSVR
SAKVHFIRMFSAPVGIVQFSIDEKRHRKIWVKQSCNWTDGTSKFCQEFDLADLFEPMDTN
TIWCLPQS
NT seq
3267 nt
NT seq
+upstream
nt +downstream
nt
atgactcaggaagaagagttcatggacgaagacgtgttcataaacgaaaccctcgtctcc
gaggacgaagaatccctcattctccgcgacattgagcagcgccaggccctcgccaaccgc
ctctccaagtggacacgtcctcctctctccgccggctacgtcgcccaatctcgtagcgtc
ctttttcagcagctagagattgattacgtgattgcagagagtcacggggagttgctgccg
aactcgtctggacctgtcgccattatcagaatatttggagttactaaggaaggacacagt
gtttgttgcaatgttcatgggtttgaaccatatttctacatctgttgccctcctggaatg
ggtccagatgatatctcccattttcatcaaactctcgagggaaggatgagagaagccaat
agaaacagtaatgtgggaaaattcgttcgccgtattgaaatggtgcagagaaggagtatt
atgtactatcagcaatccaattcccaaccctttctcaaaattgtagttgcactcccaaca
atggttgccagctgccgtggtattcttgataggggtattcaacttgatggtctgggaatg
aagagcttcttgacttatgaaagcaatgtactttttgcccttcgcttcatgattgattgt
aacatagttggtggaaattggattgggattcctgccggaaaatataagaaaacagcgaaa
agcttgtcttactgccagttagagtttgattgcttgtattctgaattgattagtcatgct
ccagaaggggaatattcaaagatggctccgtttcgcattttgagttttgacatcgagtgt
gctggtcgtaaaggtcattttcctgagcctacccatgatcctgttatccagattgctaat
ttggttactttacaaggagaagaccagccatttattcgtaatgtgatgacccttaaatca
tgttctcctatcgttggtgttgatgtgatgccatttgaaacagaaagagaagtcctgctg
gcttggagggattttattcgtgaagtggaccctgatattattattggatacaacatttgc
aaatttgacttgccatatcttattgagagagctttgaacctgaagatagcagaatttcca
attctgggtcgtatcaggaacagtagagttcgagtaaaggatacaactttctcatcaagg
cagtacggaaccagggaaagtaaagaagttgcagtagaagggagagttacgtttgattta
ctccaggttatgcaaagagactacaaattaagttcttattcactgaattctgtgtcatca
cacttcctttctgagcagaaagaggatgttcatcattcaattatatccgatcttcagaat
ggaaatgcagaaactaggaggcgccttgctgtgtattgtttgaaggatgcatatctccct
cagcggcttttggataaattgatgttcatttacaattatgtggagatggctcgagtaaca
ggtgtcccaatttcttttctactttccagaggccaaagcattaaggtactttctcaactt
cttaggagggcaaggcagaagaatctggtcattcctaatgccaaacaggctgggtctgaa
caaggaacatttgaaggtgccactgtattggaggcaagggctggattttatgaaaaacca
attgctactttagattttgcatccttgtatccatctattatgatggcctataacttatgt
tattgcactctggtgatccctgaagatgctcgcaagctcaacatacctccagagtctgtg
aacagaactccatctggtgaaacatttgttaaatcaaatttgcagaagggaatacttcct
gaaatacttgaagagctattaacagcccgtaaaagggcaaaagcagacttaaaggaggcc
aaggatcccctggagaaggcagtgctagatggtagacagctagccctgaagattagtgcc
aattctgtgtatgggtttacaggggctaccattggtcagttaccatgtttagagatatca
tcgagtgtaacaagctatggtcgacaaatgatcgagcacacgaaaaaacttgtggaagat
aaatttacgacacttaatggctatgaacacaatgccgaggtaatatatggagacacagat
tcagtcatggtacaatttggtgtttctgctgtagaagaggctatgaacttggggagagaa
gctgctgaacatattagtggaactttcacaaaacccatcaaactagaatttgagaaggtt
tactatccatatctcctgattagcaagaagagatatgctggtttgttttggacaaaacca
gacaactttgacaaaatggacactaaaggtattgaaacagttcgaagagacaattgttta
ttggtcaaaaacctggtgaacgattgccttcacaaaatattgattgacagggacattcct
ggggcagtccagtatgtcaagaatgcaatttcagatcttctcatgaatcgtatggactta
tcacttctggttattacaaagggtttaacgaagacaggagatgattacgaagtaaaggca
gctcatgttgaacttgctgaaaggatgcgcaagcgagatgctgccactgctccaaatgtt
ggagacagagtaccatatgttattattaaagctgcaaaaggtgcaaaggcatatgagaga
tcagaggatcctatctatgtgctagagaacaacatacccatagatcctcattactatctt
gagaatcaaattagcaagccaattctgagaatttttgagccaattctgaagaatgctagc
aaagagcttctccatggaagtcatacaagatctatttctatttctacaccgtcaaacagt
ggcatattgagatttgctaagaaacagctacctgcattggttgtaaagctttacttggca
agggttatcacactctctgttcacattgcaaaggaagggaggctgagctgtactgtaaaa
cagtatctcaagtgtctgagctggagatgctttttgggaggttgtggacacagtgtcagg
agtgccaaggttcacttcatcaggatgttctctgcaccagtcgggattgtccaattttct
atcgacgaaaaaaggcacagaaagatatgggtgaagcaaagttgcaattggacagatgga
acttctaagttttgccaagaatttgaccttgcggatctcttcgaaccaatggacacaaat
acaatctggtgtttgccacaatcctga
DBGET
integrated database retrieval system
