Glycine max (soybean): 780540
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Entry
780540 CDS
T01710
Symbol
LCL3
Name
(RefSeq) protein LHY
KO
K12133
MYB-related transcription factor LHY
Organism
gmx
Glycine max (soybean)
Pathway
gmx04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
gmx00001
]
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
780540 (LCL3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gmx03000
]
780540 (LCL3)
Transcription factors [BR:
gmx03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-factors
780540 (LCL3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myb_DNA-binding
Myb_DNA-bind_7
Myb_DNA-bind_6
Motif
Other DBs
NCBI-GeneID:
780540
NCBI-ProteinID:
NP_001345918
UniProt:
I1NCR9
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Position
19:50922131..50935765
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AA seq
749 aa
AA seq
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MDADSSGEEVLIKTRKPYTITKQRERWTEEEHNRFLEALKLYGRAWQRIEEHIGTKTAVQ
IRSHAQKFFTKLEKEAFVKGVPIGQALDIDIPPPRPKRKPNNPYPRKTNVGGAPTLHSGA
RHGKPLISIVSSLGKQALGLEKEPLPEKHDVDLRPSTVKENKDQSCSKVFTILQEAPCSS
VSSANKNSTSILVPLRNSCALRKFIPSVKDVITQDETNDSFVTDDLENQKLEIDDGKHTQ
KSNGTCKVSKSENSGASELVQTEKTDGLNCALTIEGVQGNQNYPRHVPVHVVDGNLGTST
QNPSPDMVFQDSIFQPKGGVNGQPNLVTISATSNISESQNNTARSSIHQSFPPCPTFTQD
DYHSFLQVSSTFSSLIVSTLLQNPAAHAAASFAATFWPYANAETSADSPMCTPDFPSRQI
GSPPSVTAIAAATVAAATAWWAAHGLLPLCAPLHTAFACPPASAIAVPLMNIDESPQKTE
QEEIKPQNSSLQDQILDPEHSEAQHSAPKSPAVFSSKSEERGDANLNTSPKATNHETNQV
ISENPDSNKMKGRKPVDRSSCGSNTTSSSEETELLLKDEKEKEEPKTPDANILDTELSNR
RSRSINNLTDSWKEVSEEGRLAFQALFSREVLPQSFSPTHDLINEDNQIDSIKDNDQNTD
YKDEDLESKKCSSNCDGVQKNLLFVKDNNEEEGLLIIGLGPGKLKTRPTGFKPYKRCSVE
ANENRIGTACNQGEEKGPKRIRLNGEAST
NT seq
2250 nt
NT seq
+upstream
nt +downstream
nt
atggacgccgactcctctggagaagaagtgcttattaaaacaagaaagccatatactatc
acaaagcaaagagaacgatggacagaggaggaacataacagatttctagaagccttgaag
ctatacgggcgagcatggcagcgcatagaagagcatataggaacaaagactgctgtgcaa
atcaggagtcatgctcagaaattctttacaaagttggagaaagaggcctttgtaaagggt
gttccaataggacaagctcttgatatagacatcccccctccacggccaaaaagaaaacca
aacaatccttatccccggaagaccaatgttggtggtgccccaacattacatagcggagca
aggcatggaaagcctctcatttcaattgtatcttcacttggtaaacaagcattgggcttg
gagaaagaaccccttccagagaagcatgatgtcgacctaaggccatcaaccgtaaaagaa
aataaggaccaaagctgctcaaaagtatttaccattctccaagaggcaccctgttcatct
gtatcttccgccaacaagaattcaacatcaatattagtgccgctgagaaattcatgtgcc
ctaaggaagtttataccttcggtgaaagatgtgataactcaagatgaaaccaacgactct
tttgttactgatgatcttgaaaatcagaagttggagatagatgatggcaagcacactcaa
aagtctaatggcacttgtaaagtctctaagtcggagaattctggtgcttcagaattggtt
caaactgagaaaacagatggtcttaattgtgcattaacaattgaaggggtgcaaggcaat
cagaattacccaagacatgtccctgtgcacgttgttgatgggaaccttggaactagtact
caaaatccatccccagatatggtgtttcaagactccatatttcagccgaaaggaggggtt
aatgggcaacctaaccttgtcaccatttctgctacatcaaacataagtgaaagtcaaaac
aacactgcacggtcctctattcatcaatcatttcctccttgtcctaccttcacacaggat
gattatcattcatttcttcaggtgtcctccacattttcaagtcttattgtctctaccttg
ctacaaaaccctgcagcccatgctgcagcaagttttgctgctacattttggccctatgca
aatgcagaaacttccgcagattctcccatgtgcactccagattttccatcaagacaaatt
ggctcgcctccaagtgtgacagctattgcagctgctacagtagctgccgcaaccgcatgg
tgggctgcccatggactgcttcctttgtgtgctccgctccatacagcttttgcctgtcct
cctgcatcagcgattgcagttccattaatgaatattgatgaatcaccacaaaaaacagaa
caagaagagattaaaccacaaaattcttctctgcaagatcagatactggatccagaacac
tcagaagctcaacattcagctcctaagtccccagctgttttttcatccaaatctgaggag
aggggagatgccaatttaaatacttcaccaaaggctactaatcatgagacgaatcaggtc
atttctgagaaccccgattccaacaaaatgaagggcagaaaacctgtagaccgttcctca
tgtggttccaacacaacctctagcagtgaagagaccgagttactactgaaggatgagaaa
gaaaaggaagagcccaaaacacctgatgcaaacattttagataccgagcttagtaatcgt
cgtagtagaagcattaacaaccttactgattcttggaaggaggtctctgaagaggggcgt
cttgcctttcaggctctattctccagagaggtgttgccacaaagcttttcacctactcat
gatttgataaatgaggataatcagatagacagcatcaaggataacgaccaaaacacagac
tacaaagatgaagaccttgaaagcaagaaatgcagttctaattgtgatggggtgcagaaa
aatctgctatttgtcaaagataacaatgaggaggagggactgctaatcataggtcttgga
ccaggaaagctaaagactcgtccaacagggtttaaaccttacaaaagatgttcggtagag
gccaatgaaaacaggatcggaacagcctgcaaccaaggtgaagaaaaaggtcctaagaga
atacgcttgaatggggaggcttcaacttga
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