Glutamicibacter mysorens: XH9_02445
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Entry
XH9_02445 CDS
T08403
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
gmy
Glutamicibacter mysorens
Pathway
gmy03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gmy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
XH9_02445 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gmy03021
]
XH9_02445 (rho)
03019 Messenger RNA biogenesis [BR:
gmy03019
]
XH9_02445 (rho)
Transcription machinery [BR:
gmy03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
XH9_02445 (rho)
Messenger RNA biogenesis [BR:
gmy03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
XH9_02445 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATP-synt_ab
Rho_RNA_bind
Rho_N
AAA_25
Spore_III_AA
NACHT
Motif
Other DBs
NCBI-ProteinID:
UTM47700
LinkDB
All DBs
Position
complement(537019..539229)
Genome browser
AA seq
736 aa
AA seq
DB search
MTETTSLTEGVDTKTSENKSAGLASLKMTQLQQLASQLGITGGSRMRKADLVKAIGDHQR
GGSVAAKDAKAAQEAKAAQEAKSAKAEAPAAKAEAAAEPAKETKARARRAPKAAAKEQAE
TETAAPETAAAAEAPAEKPARARRTSRRVTDSGKVAAAAETKEAAAEAPAEKQAPAEEAK
APRQRRNSRSSKPAEQPAEQGTEPAEAPAENAENNGEAREERRERGNRRERGNRRERNNE
RNDAAEPENAEERTDRREERTDRREERRERNNDRNDRNNRRERNNDRNDRNNDSNDSENT
EERPERSERNDRRERRERNNDRNDRNNRRERNNDRNDRNNRNRRNRRDDDEPQLSEDDVV
LPIAGILDVLENYAFVRTSGYLPGPNDVYVTLGQVKKYNLRKGDAIVGAIRQPREGETPN
PRQKFNALVQLTSVNGKKPEDNKERVEFNKLVPLYPTERLRLETDPKLVGPRVIDLVAPI
GKGQRGLIVSPPKAGKTLILQSIANAITTNNPEVHLMMVLVDERPEEVTDMQRTVKGEVI
ASTFDRPADDHTTVAELAIERAKRLVEMGMDVVVLLDSMTRLGRAYNLAAPASGRILSGG
VDSAALYPPKRFFGAARNIENGGSLTILATALVETGSKMDEVIFEEFKGTGNMELRLSRQ
LAEKRIFPAVDVNASSTRREEQLMSAEEVRIMWRLRRMLSGIDPQQALEVLTGKIRETQS
NAEFLMLVNKTTPNKD
NT seq
2211 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgaaaccacgagcctcaccgaaggcgtggacaccaagacttccgaaaataagagt
gccggtctggcctctttgaagatgacccagctgcagcagttggcctcccagctgggaatt
accggcgggtcgcgcatgcgcaaggctgatctggtcaaggccatcggcgaccaccagcgc
ggtggctccgttgccgccaaggacgccaaggcagcgcaggaagccaaggccgcgcaggaa
gcgaagtcggccaaggccgaagcacctgcagccaaggcagaagccgccgccgagccggcc
aaggaaaccaaggcccgcgcacgccgcgccccgaaggccgcagccaaggagcaggccgag
accgagaccgccgcaccggaaaccgcggcagctgccgaagcaccggcggaaaagcctgct
cgcgcacgccgcacctcgcgccgcgtgaccgactccggcaaggttgccgctgctgccgaa
accaaggaagcagccgccgaagcacctgccgagaagcaggccccagcagaggaagccaag
gccccgcgccagcgccgcaactcgcgcagcagcaagccagctgagcagcctgcagagcag
ggcaccgagccagccgaggcaccggcagagaacgccgagaacaacggcgaagcacgcgaa
gagcgccgcgagcgcggcaaccgccgtgagcgtggcaaccgccgcgagcgcaacaacgag
cgcaatgacgccgccgagccggagaacgccgaagagcgcaccgaccgccgcgaagagcgc
accgaccgccgcgaagagcgccgcgagcgcaacaacgatcgcaatgaccggaacaaccgc
cgtgagcgcaacaacgatcgcaatgatcgcaacaacgactcgaacgactcggagaacacc
gaggagcgtccggaacgcagcgagcgcaatgaccgccgtgagcgccgcgagcgcaacaat
gaccgcaatgaccggaacaaccgccgtgagcgcaacaacgaccgcaacgaccggaacaac
cgcaaccgccgcaaccgccgtgatgacgacgagccgcagctgagcgaagacgatgtcgtg
ctgccgatcgccggcatcctggacgtgctggagaactacgcgttcgtccgcacctccggc
tacctgcccggcccgaacgacgtctacgtcaccctgggccaggtcaagaagtacaacctg
cgcaagggcgacgcgatcgtcggcgccatccgccagccgcgcgagggcgagaccccgaac
ccgcgccagaagttcaacgccctggtgcagctgacctccgtcaacggcaagaagccggaa
gacaacaaggaacgcgtcgagttcaacaagctcgtgccgctgtacccgaccgagcgcctg
cgcctggaaaccgacccgaagctggtcggcccgcgcgtcatcgacctggtcgccccgatc
ggcaagggccagcgcggcctgatcgtctcgcctccgaaggccggcaagaccctgatcctg
cagtccatcgcgaacgccatcacgaccaacaacccagaggtgcacctgatgatggtgctg
gtcgacgagcgtcccgaagaagtcaccgacatgcagcgcacggtcaagggcgaggtcatc
gcctcgaccttcgaccgcccggcagatgaccacaccaccgtggccgagctggccatcgag
cgcgccaagcgcctggtggaaatgggcatggatgtcgtggtcctgctggactcgatgacc
cgcctgggccgcgcctacaacctggcagcaccggcctccggacgcatcctctccggcggc
gtggactcggcggcgctgtacccgccgaagcgcttcttcggtgccgcccgcaacatcgag
aacggcggctcgctgaccattctggccaccgccctggtggagaccggatccaagatggac
gaggtcatcttcgaggaattcaagggcaccggcaacatggagcttcgcctctcgcgccag
ctggccgagaagcgcattttccctgcggtggatgtcaacgcatcctcgacccgccgcgaa
gagcagctgatgagtgccgaagaggtgcgcatcatgtggcgcctgcgccgcatgctctcg
ggcatcgatccgcagcaggcactggaggtgctcaccgggaagatccgcgagacccagtcc
aacgcggaattcctgatgctggtcaacaagaccactccaaacaaggattag
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