Glutamicibacter mysorens: XH9_03475
Help
Entry
XH9_03475 CDS
T08403
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
gmy
Glutamicibacter mysorens
Pathway
gmy03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gmy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
XH9_03475
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gmy03019
]
XH9_03475
03016 Transfer RNA biogenesis [BR:
gmy03016
]
XH9_03475
Enzymes [BR:
gmy01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
XH9_03475
Messenger RNA biogenesis [BR:
gmy03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
XH9_03475
Transfer RNA biogenesis [BR:
gmy03016
]
Prokaryotic type
tRNA degradation factors
XH9_03475
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
S1
KH_1
RNase_PH_C
KH-I_KHDC4-BBP
KH_KhpA-B
KH_2
S1_RRP5
VCPO_N
Motif
Other DBs
NCBI-ProteinID:
UTM47888
LinkDB
All DBs
Position
complement(758704..760935)
Genome browser
AA seq
743 aa
AA seq
DB search
MEGPEIQFAEALIDNGRYGTRTIRFETGRLAKQAAGSAMVYIDEETALLSATTAGKHPRE
GFDFFPLTVDVEERMYAAGRIPGSFFRREGRPSTEAILACRLMDRPLRPAFVKGLRNEVQ
VVVTVLSIEPDELYDVVAINASSMSTQLSGLPFSGPIGGVRVALVDDGNGAQWVAFPKHS
ELKNAVFNMVVAGRIAGDDVAIMMVEAEATDNAWELIKERGAQAPTEEVVAEGLEAAKPF
IKVLCEAQADLAARAAKETVEFPVFRDYEDDAFTAVEAAASTRLAEIYTIADKQERDNAA
SDYKDEILASLAGEGNAFEGRESEISKAFGAVTKHIVRQRILTDQIRIDGRGLADIRQLS
AEVEVLPRVHGSAIFERGETQIMGVTTLNMLKMEQQIDSLSPVKSKRYMHNYNFPPYSTG
ETGRVGSPKRREIGHGALAERALVPVLPSREEFPYAIRQVSEALGSNGSTSMGSVCASTL
SLLNAGVPLKAAVAGIAMGLVSDTVDGETRYAALTDILGAEDAMGDMDFKVAGTSEFVTA
IQLDTKLDGIPASVLAAALTQAREARLHILNVLNQAIDAPDELNVNAPRIISVKIPVDKI
GEVIGPKGKMINQIQEDTGADISIEDDGTVLIGATNGESAEAARSAINAIANPQVPEVGE
RYLGTVVKLTTFGAFVSLTPGKDGLLHISELRKINDGKRVEDVEDVVGVGQKLQVEITKI
DDRGKLSLAPVIEEEAEEAVAAE
NT seq
2232 nt
NT seq
+upstream
nt +downstream
nt
atggagggtccagaaatccaattcgccgaagcgctgatcgacaacggccgctacggtacc
cgcaccatccgcttcgaaaccggccgcctcgccaagcaggctgctggctcggcaatggtc
tacatcgacgaagagaccgcgctgctctcggcaactaccgccggcaagcacccgcgcgaa
ggcttcgacttcttcccgctgaccgtggacgtcgaggagcgcatgtacgctgccggccgc
atcccgggcagcttcttccgccgcgaaggccgcccatcgaccgaagccatcctggcttgc
cgcctgatggaccgcccgctgcgcccagccttcgtcaagggcctgcgcaacgaggtccag
gttgtcgtcaccgtcctgtccatcgagccggatgagctgtacgacgtcgtggcaatcaac
gcttcgtcgatgtccacccagctttcgggcctgccattctccggcccaatcggcggcgtt
cgcgttgcactggttgatgacggaaacggcgcccagtgggttgccttccctaagcactcc
gagctgaagaacgctgtcttcaacatggttgttgccggccgcatcgctggcgatgacgtt
gccatcatgatggtggaagccgaagctaccgacaacgcttgggaactgatcaaggaacgc
ggcgcccaggctccaaccgaagaggttgtcgccgaaggccttgaggctgccaagccattc
atcaaggtcctgtgcgaggcccaggccgacctggctgcccgcgctgccaaggaaaccgtt
gagttcccggtcttccgcgactacgaagacgatgccttcaccgctgtcgaggctgccgct
tcgacccgcctggcagagatctacaccatcgctgacaagcaggagcgcgacaacgccgca
agcgactacaaggacgagatcctggcatcgctggctggcgaaggcaacgctttcgaaggc
cgcgagtccgaaatctccaaggccttcggtgcggtgaccaagcacatcgtgcgccagcgc
atcctgaccgaccagatccgcatcgacggccgcggcctggctgacatccgccagctctcc
gccgaggtcgaggtgctgcctcgcgtgcacggttcggccatcttcgagcgtggcgaaacc
cagatcatgggcgtcaccaccttgaacatgctgaagatggagcagcagatcgactcgctg
tccccagtgaagtccaagcgctacatgcacaactacaacttcccgccatactcgaccggc
gagaccggccgtgttggttcgccgaagcgccgcgaaatcggccacggcgcactggcagag
cgcgcactggttccagtgctgccaagccgcgaggaattcccatacgcaatccgccaggtc
tccgaggcactgggctccaacggctcgacctccatgggctcggtctgcgcctcgaccctg
tcgctgctgaacgccggcgtgccgctgaaggccgctgtcgcaggcatcgccatgggcctg
gtttcggacaccgttgacggcgaaacccgttacgctgctttgaccgatatcctcggcgcc
gaagacgccatgggcgacatggacttcaaggttgcaggtacctccgagttcgtgaccgcg
atccagctggacaccaagctggatggcattccggcttcggtgctggccgccgcgctgacc
caggctcgcgaagcacgtctgcacatcctgaacgtgctgaaccaggccatcgacgctccg
gatgagctgaatgtgaacgccccgcgcatcatctcggtgaagatcccagtggacaagatc
ggcgaggtcatcggccctaagggcaagatgatcaaccagatccaggaagacaccggcgct
gacatctcgatcgaggatgacggcaccgtgctgatcggcgcaaccaacggcgaatccgcc
gaggctgcccgttcggccatcaacgccatcgccaaccctcaggttcctgaggtcggcgag
cgctacctgggcaccgtcgtgaagctgaccaccttcggagcgttcgtttcgctgaccccg
ggcaaggacggcctgctgcacatctccgagctgcgcaagatcaatgacggcaagcgtgtg
gaggacgtcgaagacgtcgtcggcgttggccagaagctgcaggtggagatcaccaagatc
gatgaccgcggcaagctgtcgctggctccagtcatcgaggaagaagctgaagaagcagta
gctgctgagtag
DBGET
integrated database retrieval system
