Glutamicibacter mysorens: XH9_13635
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Entry
XH9_13635 CDS
T08403
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
gmy
Glutamicibacter mysorens
Pathway
gmy03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gmy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
XH9_13635
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gmy03019
]
XH9_13635
03009 Ribosome biogenesis [BR:
gmy03009
]
XH9_13635
Enzymes [BR:
gmy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
XH9_13635
Messenger RNA biogenesis [BR:
gmy03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
XH9_13635
Ribosome biogenesis [BR:
gmy03009
]
Prokaryotic type
rRNA helicases
XH9_13635
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
HEM4
UvrA_inter
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
UTM48922
LinkDB
All DBs
Position
2936034..2937926
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AA seq
630 aa
AA seq
DB search
MPVNTNDNQTPEEPTVLFSELGLDARVLASLADLGYEKPSPIQAATIPLLLEGRDVVGLA
QTGTGKTAAFALPALSRMAELADTNGPAKTPQILVLAPTRELALQVAEAFTSYAKYLPNF
TVLPVYGGSPYGPQLNGLRRGAQVVVGTPGRVIDHINKGSLDLSNLQYVVLDEADEMLRM
GFAEEVDKILEATPEEKQVALFSATMPRTIRRIASEYLRNPQEVAVKSKQSTGTNITQRF
LQVMGAHKLDAMTRILESEEFDGVITFVRTKMATEDLADKLKARGFTAAAINGDIPQQQR
ERTVENLRSGKIDILVATDVAARGLDVERISHVINFDIPHDTESYVHRIGRTGRAGRKGD
AILFMTPREKYLLRAIEKATRQPVTQMQLPSLDSVNDRRIQKFTDRIDKTISGQDLTTFR
EIVEKFAVEHEDLDHLEIAAALALMAQGGRPLLMTEPVMSPAKKARMDRPERGERGERGP
RARKTAAEGNAMYRLAVGRRNRVQPGSIVGALANEGGFDSSEIGGIDIRSDHTLVELPAE
LSKDQWRALSKTRIGGEAIDLQLDSGRSPRRDDDGDRGGFRGSRGGYGGGRGGRGGFGGG
RNGGRGGFGGGRGGKDRYSDSNRSGGRRDY
NT seq
1893 nt
NT seq
+upstream
nt +downstream
nt
atgcccgtaaacaccaacgacaaccagaccccggaagagccaaccgtgctcttctccgag
cttggcctggatgcccgcgtgcttgcatcgcttgccgaccttggctacgagaagccatcg
ccaatccaggcagcgaccattccactgctcctcgaaggccgcgacgttgtcggcctggcc
cagaccggtaccggcaagactgctgctttcgcactgcctgccctgtcccgcatggccgaa
ctggctgacaccaatggcccagccaagaccccgcagatcctggtcctggctccaacccgc
gagctggccctccaggtcgccgaggccttcacctcctacgccaagtacctgccgaacttc
accgttctgcccgtgtacggcggctccccatacggcccgcagctcaacggcctgcgccgt
ggcgcacaggtcgtcgtgggcaccccaggccgtgtgatcgaccacatcaacaagggttcc
ctggacctgtcgaacctgcagtacgtggtgctggatgaggccgacgaaatgctgcgcatg
ggcttcgccgaagaggtcgacaagatcctggaagcgaccccggaagagaagcaggttgcc
ctgttctcggccaccatgccacgcaccatccgccgcatcgcttcggaatacctgcgcaac
ccgcaggaagtcgccgtgaagtccaagcagtccaccggcaccaacatcacccagcgcttc
ctgcaggtcatgggcgcccacaagcttgacgccatgacccgcatcctcgaatccgaggaa
ttcgacggcgtgatcaccttcgtgcgcaccaagatggctaccgaagacctggccgacaag
ctcaaggcccgcggcttcaccgctgccgccatcaacggcgacatcccgcagcagcagcgc
gagcgcaccgtggagaacctgcgctcgggcaagatcgacatcctggtggctaccgacgtg
gcggcccgcggcctggacgtcgagcgcatttcgcacgtgatcaacttcgacatcccgcat
gacaccgagtcctacgtgcaccgcatcggccgcaccggccgtgccggccgcaagggcgac
gcgatcctgttcatgaccccgcgcgagaagtacctgctgcgtgccatcgagaaggcgacc
cgccagccggtgacccagatgcagctgccgtcgctggattcggtcaacgaccgccgcatc
cagaagttcaccgaccgcatcgacaagaccatcagcggccaggacctgactactttccgc
gagatcgtggagaagttcgctgtcgagcacgaggacctggaccacctggaaatcgcggct
gcactggctttgatggcccagggcggacgcccgctgctgatgaccgaaccggtcatgtcg
cctgcgaagaaggcccgcatggatcgcccggagcgtggcgaacgcggtgagcgcggtcca
cgtgcccgcaagaccgctgccgagggcaacgccatgtaccgtctggcagttggccgccgc
aaccgcgtgcagccaggctcgatcgttggcgcgctggccaacgagggcggcttcgattct
tcggaaatcggcggcatcgacatccgttcggaccacaccctggtggagctgccagcagag
ctgagcaaggaccagtggcgtgcactgtccaagacccgcattggcggcgaagccatcgat
ctccagctcgacagtggccgcagcccgcgccgtgacgacgatggcgaccgcggtggtttc
cgtggcagccgtggcggctacggtggtggacgtggcggccgtggtggattcggtggcgga
cgcaatggcggacgtggcggattcggcggcggacgcggtggcaaggaccgctacagcgat
tcgaaccgcagcggtggacgtcgcgactactaa
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