Glutamicibacter mysorens: XH9_16610
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Entry
XH9_16610 CDS
T08403
Name
(GenBank) Rne/Rng family ribonuclease
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
gmy
Glutamicibacter mysorens
Pathway
gmy03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gmy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
XH9_16610
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gmy03019
]
XH9_16610
03009 Ribosome biogenesis [BR:
gmy03009
]
XH9_16610
Enzymes [BR:
gmy01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
XH9_16610
Messenger RNA biogenesis [BR:
gmy03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
XH9_16610
Ribosome biogenesis [BR:
gmy03009
]
Prokaryotic type
rRNA processing factors
XH9_16610
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
Motif
Other DBs
NCBI-ProteinID:
UTM47129
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All DBs
Position
3545029..3547884
Genome browser
AA seq
951 aa
AA seq
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MTLAELNAAAGVEESPYRWRATRRTQVSTPDSTKRASRQAERRAQAARDTANDAAVELAV
AKHEDAQAQNAEAAEAAEQEAAPVEEANDVDQTGMLLAEHGSSMILNPFAVPETAQAVLA
AAVAKKQEPARRAAASNSAEDADSDDVTSRRRRRRRRGDVDLELEGGSQDDPPNTVTRVR
APRGSIESHSSVNNKVASVRGSTRLEAKRQRRRESRETGRRRQVITEAEFLARRESVERK
MIVRQREDRIQIGVLEDGVLAEHFVSKTQQDSLIGNVYVGKVQNVLPSMEAAFVDIGRGR
NAVLYAGEVNWDVAALEGAPRRIENALKAGDSVLVQVTKDPVGHKGARLTSQISLPGRYL
VYVPGGSMTGISRKLPDVERQRLKKILKDHLPENAGVIVRTAAEGASEEELTNDINRLRA
QWEGIEEQANSTKTLAPELLYSEPDLTIKVVRDVFNEDFTKLIVSGEHAWDTIEAYVMYV
APDLMGRLEKWEAEEDIFANFRVDEQIAKALDRKVFLPSGGSLVIDRTEAMTVIDVNTGK
FTGSGGNLEETVTKNNLEAAEEVVRQLRLRDIGGIIVIDFIDMVLESNRDLVLRRLVECL
GRDRTKHQVAEVTSLGLVQMTRKRMGTGLLEVFGEECEHCAGAGVITHDEPVESRKSFNS
HGEAHGKKFNDKPSRNSRRRRGGEKDEQKPVEKQDQAAGEKDEATRNALASIAAASHLDG
PADNAVSIEGEQIPVTKSVVPAQATAAPAQAAEASVTLEALEAALPGKEESSEEHDGSRK
PRRRSRSRGRNRNQAEESASTNEDAQASQEQQAAPEPVAAPKSEEQPRKRSRRASRPQES
TQQDQPVLTGLAMPAASAPAAATAPAAATAPASAPAAATATPQISTKPKRRSRRATSVQG
DATAEVLVAEVSAATGSVVQMDASGSKKEKPAEPAGNPVMLGVGVPVRELK
NT seq
2856 nt
NT seq
+upstream
nt +downstream
nt
atgaccttggccgaactcaatgccgctgccggtgtcgaggaaagcccataccgctggcgg
gccacccgccgcacccaggtttccacgcctgattccaccaagcgggccagccgccaagca
gaacgccgtgcccaggcggcacgcgataccgccaatgacgcggccgtcgagcttgccgta
gccaagcatgaagacgcacaggcgcagaacgccgaagcagctgaagccgccgagcaggaa
gctgccccggtggaagaggcgaacgacgttgaccagaccggcatgctgctggccgaacac
ggcagcagcatgatcctcaatccgtttgccgtgccggaaaccgcccaggctgtgctggcc
gcagccgtcgcgaagaagcaggaacctgcccgccgtgccgctgcctcgaattccgctgaa
gacgccgattcagacgacgtgacctcgcgtcgccgtcgccgccgtcgccgtggcgacgtg
gatctggagctcgaaggcggctcgcaggatgatccgccgaacaccgtcacccgcgtacgt
gctccgcgtggaagcatcgagagccacagctcggtcaacaacaaggtcgcctcggtgcgc
ggttccacccgtctggaagccaagcgccagcgccgccgcgaatcgcgcgaaaccggacgc
cgccgccaggtgattaccgaggccgagttcctggcccgccgcgagtccgtcgagcgcaag
atgatcgtgcgccagcgcgaagaccgcatccagattggcgtgctggaagacggcgtgctt
gcagagcacttcgtctccaagacccagcaggattcgctgatcggcaacgtgtacgtcggc
aaggtgcagaatgtgctgccctccatggaagccgctttcgtggatatcggacgcggccgc
aacgccgtgctgtacgcaggcgaagtcaactgggacgtggcagcgctcgaaggcgcgcca
cgccgcatcgagaacgcattgaaggccggcgactcggtccttgtccaggtcaccaaggac
ccggtaggccacaagggtgcccgcctgaccagccagatctcgctgccgggccgctacctg
gtctacgtgccgggcggttcgatgaccggcatctcgcgcaagctgcccgatgttgagcgc
cagcgcctgaagaagatcctcaaggaccacctgccggaaaacgctggcgtcatcgtgcgc
accgccgccgaaggcgcctccgaggaggagctgaccaacgatatcaaccggctgcgcgcg
cagtgggaaggcattgaggaacaggcgaactccaccaagaccctggctccggaactgctg
tactcggaaccggacctgaccatcaaggtagtccgcgacgtcttcaacgaggacttcacc
aagctgatcgtctcgggcgagcacgcctgggacaccatcgaggcatatgtcatgtacgtg
gccccggacctgatgggacgcctggagaaatgggaagccgaagaggacatcttcgccaat
ttccgcgtggacgagcagatcgcgaaggcactggaccgcaaggtcttcctgccttcgggc
ggctcgctggtcatcgatcgcaccgaggcgatgactgtcatcgacgtcaacacgggcaag
ttcaccggttcgggtggcaacctcgaagagaccgtgaccaagaacaacttggaagcggcc
gaggaagtcgtgcgccagctgcgcctgcgcgacatcggcggcatcatcgtcatcgacttc
atcgacatggtgcttgagtcgaaccgcgacttggtgctgcgccgcctggtcgagtgcctg
ggccgcgaccggaccaagcaccaggtggccgaagtgacctcgctgggcctggtgcagatg
acccgcaagcgcatgggcaccggactgctcgaagtcttcggcgaagagtgcgagcactgc
gctggtgctggggtcatcacccacgacgagccggtcgaatcgcgcaagtccttcaactcg
catggcgaagcgcatggcaagaagttcaacgacaagccaagccgcaattcccgccgccgc
cgcggcggcgagaaggacgagcagaagccggttgagaagcaggaccaggctgcaggggag
aaggacgaagccacgcgcaacgccctggccagcatcgccgccgcctcgcaccttgacggc
cctgctgataacgcagtgagcatcgagggcgagcagattccggtgacgaagtccgtggtc
cccgcacaggccaccgcggcccctgcgcaggccgccgaggcttcggtgaccctggaggcc
ctggaagccgccttgcctggcaaggaagagtccagcgaagagcacgatggcagccgcaag
ccgcgacgccgttcgcgctcccgcggacgcaaccgcaaccaggccgaggaaagcgcttcg
accaacgaggacgcacaggccagccaggaacagcaagctgctcctgaacctgttgctgcc
ccgaagtccgaagagcagcctcgcaagcgttcgcgccgtgcatcgcgtccgcaggagtcg
acgcagcaggaccagccggtgcttaccggcctggccatgccagctgccagtgctcctgcc
gctgcaactgcacctgccgctgcaactgcacctgcttccgctccggctgccgccacggca
accccgcagatttccacgaagccaaagcgccgcagtcgtcgggccacctcggtccagggc
gatgcgacggcagaggtcctcgtggcagaggtatccgccgctaccggttcggtagtccag
atggatgcctccggttcgaagaaggaaaaaccagctgagcctgccgggaatccggtcatg
ctcggtgtgggtgttccggtacgcgaactgaaatag
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