KEGG   GENOME: Pan troglodytes (chimpanzee)
Entry
T01005            Complete  Genome                                 
Org code
ptr
Name
Pan troglodytes (chimpanzee)
Annotation
yes
Taxonomy
TAX:9598
  Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Brite
KEGG organisms [BR:br08601]
KEGG organisms in the NCBI taxonomy [BR:br08610]
KEGG organisms in taxonomic ranks [BR:br08611]
KEGG organisms: animals [BR:br08612]
Data source
RefSeq (Assembly: GCF_028858775.2 Chromosome)
BioProject: 945513
Chromosome
1
  Sequence
  Length
231299448
Chromosome
2
  Sequence
  Length
201579334
Chromosome
3
  Sequence
  Length
191670129
Chromosome
4
  Sequence
  Length
178964043
Chromosome
5
  Sequence
  Length
183320697
Chromosome
6
  Sequence
  Length
174648847
Chromosome
7
  Sequence
  Length
155691389
Chromosome
8
  Sequence
  Length
146288486
Chromosome
9
  Sequence
  Length
136991367
Chromosome
10
  Sequence
  Length
140160335
Chromosome
11
  Sequence
  Length
118863153
Chromosome
12
  Sequence
  Length
122853238
Chromosome
13
  Sequence
  Length
144476839
Chromosome
14
  Sequence
  Length
120149342
Chromosome
15
  Sequence
  Length
104701121
Chromosome
16
  Sequence
  Length
93846347
Chromosome
17
  Sequence
  Length
90695042
Chromosome
18
  Sequence
  Length
94528409
Chromosome
19
  Sequence
  Length
99595324
Chromosome
20
  Sequence
  Length
68087067
Chromosome
21
  Sequence
  Length
78115444
Chromosome
22
  Sequence
  Length
51350302
Chromosome
23
  Sequence
  Length
59520411
Chromosome
X
  Sequence
  Length
153896354
Chromosome
Y
  Sequence
  Length
36447294
Chromosome
MT; Circular
  Sequence
  Length
16554
Statistics
Number of nucleotides:    3177756316
Number of protein genes:       22560
Number of RNA genes:            4167
Created
2005
Reference
  Authors
Makova KD, Pickett BD, Harris RS, Hartley GA, Cechova M, Pal K, Nurk S, Yoo D, Li Q, Hebbar P, et al.
  Title
The complete sequence and comparative analysis of ape sex chromosomes.
  Journal
Nature 10.1038/s41586-024-07473-2 (2024)
DOI:10.1038/s41586-024-07473-2
Reference
  Authors
Chimpanzee Sequencing and Analysis Consortium.
  Title
Initial sequence of the chimpanzee genome and comparison with the human genome.
  Journal
Nature 437:69-87 (2005)
DOI:10.1038/nature04072
Reference
PMID:15164055 (chromosome 22)
  Authors
Watanabe H, Fujiyama A, Hattori M, Taylor TD, Toyoda A, Kuroki Y, Noguchi H, BenKahla A, Lehrach H, Sudbrak R, et al.
  Title
DNA sequence and comparative analysis of chimpanzee chromosome 22.
  Journal
Nature 429:382-8 (2004)
DOI:10.1038/nature02564
Reference
PMID:16388311 (chromosome Y)
  Authors
Kuroki Y, Toyoda A, Noguchi H, Taylor TD, Itoh T, Kim DS, Kim DW, Choi SH, Kim IC, Choi HH, et al.
  Title
Comparative analysis of chimpanzee and human Y chromosomes unveils complex evolutionary pathway.
  Journal
Nat Genet 38:158-67 (2006)
DOI:10.1038/ng1729
Reference
PMID:7530363
  Authors
Horai S, Hayasaka K, Kondo R, Tsugane K, Takahata N
  Title
Recent African origin of modern humans revealed by complete sequences of hominoid mitochondrial DNAs.
  Journal
Proc Natl Acad Sci U S A 92:532-6 (1995)
DOI:10.1073/pnas.92.2.532
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