KEGG   GENOME: Pan troglodytes (chimpanzee)
Entry
T01005            Complete  Genome                                 
Org code
ptr
Name
Pan troglodytes (chimpanzee)
Annotation
yes
Taxonomy
TAX:9598
  Lineage
Eukaryota; Metazoa; Chordata; Mammalia; Primates; Hominidae; Pan; Pan troglodytes
Org group
Animals; Mammals; Primates
Brite
KEGG organisms [BR:br08601]
KEGG organisms in the NCBI taxonomy [BR:br08610]
KEGG organisms in taxonomic ranks [BR:br08611]
KEGG organisms: animals [BR:br08612]
Data source
RefSeq (Assembly: GCF_028858775.2 Chromosome)
Chromosome
1 (RS:NC_072398)
2 (RS:NC_086015)
3 (RS:NC_072401)
4 (RS:NC_072402)
5 (RS:NC_072403)
6 (RS:NC_072404)
7 (RS:NC_072405)
8 (RS:NC_072406)
9 (RS:NC_072407)
10 (RS:NC_072408)
11 (RS:NC_072409)
12 (RS:NC_072410)
13 (RS:NC_072411)
14 (RS:NC_072412)
15 (RS:NC_072413)
16 (RS:NC_072414)
17 (RS:NC_072415)
18 (RS:NC_072416)
19 (RS:NC_072417)
20 (RS:NC_072418)
21 (RS:NC_072419)
22 (RS:NC_072420)
23 (RS:NC_086016)
X (RS:NC_072421)
Y (RS:NC_072422)
MT; Circular (RS:NC_001643)
Statistics
Number of protein genes:       22560
Number of RNA genes:            4167
Created
2005
Reference
  Authors
Makova KD, Pickett BD, Harris RS, Hartley GA, Cechova M, Pal K, Nurk S, Yoo D, Li Q, Hebbar P, et al.
  Title
The complete sequence and comparative analysis of ape sex chromosomes.
  Journal
Nature 630:401-411 (2024)
DOI:10.1038/s41586-024-07473-2
Reference
  Authors
Chimpanzee Sequencing and Analysis Consortium.
  Title
Initial sequence of the chimpanzee genome and comparison with the human genome.
  Journal
Nature 437:69-87 (2005)
DOI:10.1038/nature04072
Reference
PMID:15164055 (chromosome 22)
  Authors
Watanabe H, Fujiyama A, Hattori M, Taylor TD, Toyoda A, Kuroki Y, Noguchi H, BenKahla A, Lehrach H, Sudbrak R, et al.
  Title
DNA sequence and comparative analysis of chimpanzee chromosome 22.
  Journal
Nature 429:382-8 (2004)
DOI:10.1038/nature02564
Reference
PMID:16388311 (chromosome Y)
  Authors
Kuroki Y, Toyoda A, Noguchi H, Taylor TD, Itoh T, Kim DS, Kim DW, Choi SH, Kim IC, Choi HH, et al.
  Title
Comparative analysis of chimpanzee and human Y chromosomes unveils complex evolutionary pathway.
  Journal
Nat Genet 38:158-67 (2006)
DOI:10.1038/ng1729
Reference
PMID:7530363
  Authors
Horai S, Hayasaka K, Kondo R, Tsugane K, Takahata N
  Title
Recent African origin of modern humans revealed by complete sequences of hominoid mitochondrial DNAs.
  Journal
Proc Natl Acad Sci U S A 92:532-6 (1995)
DOI:10.1073/pnas.92.2.532
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