| Entry |
|
|---|
| Org code |
mdm
|
|---|
| Name |
Malus domestica (apple) |
|---|
| Category |
Reference genome
|
|---|
| Annotation |
yes |
|---|
| Taxonomy |
|
|---|
| Lineage |
Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliopsida; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Maleae; Malus |
|---|
| Brite |
KEGG organisms [BR:br08601]
KEGG organisms in the NCBI taxonomy [BR:br08610]
KEGG organisms in taxonomic ranks [BR:br08611]
KEGG organisms: plants [BR:br08613]
|
|---|
| Data source |
|
|---|
| Keywords |
Photosynthesis
|
|---|
| Chromosome |
01 |
|---|
| Sequence |
|
|---|
| Length |
32452868 |
|---|
| Chromosome |
02 |
|---|
| Sequence |
|
|---|
| Length |
37717778 |
|---|
| Chromosome |
03 |
|---|
| Sequence |
|
|---|
| Length |
37919568 |
|---|
| Chromosome |
04 |
|---|
| Sequence |
|
|---|
| Length |
31738030 |
|---|
| Chromosome |
05 |
|---|
| Sequence |
|
|---|
| Length |
46786874 |
|---|
| Chromosome |
06 |
|---|
| Sequence |
|
|---|
| Length |
35382598 |
|---|
| Chromosome |
07 |
|---|
| Sequence |
|
|---|
| Length |
36939614 |
|---|
| Chromosome |
08 |
|---|
| Sequence |
|
|---|
| Length |
31204305 |
|---|
| Chromosome |
09 |
|---|
| Sequence |
|
|---|
| Length |
35893544 |
|---|
| Chromosome |
10 |
|---|
| Sequence |
|
|---|
| Length |
43556527 |
|---|
| Chromosome |
11 |
|---|
| Sequence |
|
|---|
| Length |
41353263 |
|---|
| Chromosome |
12 |
|---|
| Sequence |
|
|---|
| Length |
31835694 |
|---|
| Chromosome |
13 |
|---|
| Sequence |
|
|---|
| Length |
44611933 |
|---|
| Chromosome |
14 |
|---|
| Sequence |
|
|---|
| Length |
31639640 |
|---|
| Chromosome |
15 |
|---|
| Sequence |
|
|---|
| Length |
56249447 |
|---|
| Chromosome |
16 |
|---|
| Sequence |
|
|---|
| Length |
40837467 |
|---|
| Chromosome |
17 |
|---|
| Sequence |
|
|---|
| Length |
34656096 |
|---|
| Chromosome |
MT; Circular |
|---|
| Sequence |
|
|---|
| Length |
396947 |
|---|
| Chromosome |
CP; Circular |
|---|
| Sequence |
|
|---|
| Length |
160288 |
|---|
| Statistics |
Number of nucleotides: 651332481
Number of protein genes: 39340
Number of RNA genes: 1928
|
|---|
| Created |
2014
|
|---|
| Reference |
|
|---|
| Authors |
Su Y, Yang X, Wang Y, Li J, Long Q, Cao S, Wang X, Liu Z, Huang S, Chen Z, et al. |
|---|
| Title |
Phased telomere-to-telomere reference genome and pangenome reveal an expansion of resistance genes during apple domestication. |
|---|
| Journal |
|
|---|
| Reference |
|
|---|
| Authors |
Daccord N, Celton JM, Linsmith G, Becker C, Choisne N, Schijlen E, van de Geest H, Bianco L, Micheletti D, Velasco R, et al. |
|---|
| Title |
High-quality de novo assembly of the apple genome and methylome dynamics of early fruit development. |
|---|
| Journal |
|
|---|
| Reference |
|
|---|
| Authors |
Goremykin VV, Lockhart PJ, Viola R, Velasco R |
|---|
| Title |
The mitochondrial genome of Malus domestica and the import-driven hypothesis of mitochondrial genome expansion in seed plants. |
|---|
| Journal |
|
|---|
| LinkDB |
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|---|
