KEGG   GENOME: Rhizorhabdus wittichii DC-6
Entry
T05200            Complete  Genome                                 
Org code
sphd
Name
Rhizorhabdus wittichii DC-6 (Sphingomonas wittichii DC-6)
Annotation
yes
Taxonomy
TAX:1283312
  Lineage
Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria; Sphingomonadales; Rhizorhabdaceae; Rhizorhabdus; Rhizorhabdus wittichii
Brite
KEGG organisms [BR:br08601]
KEGG organisms in the NCBI taxonomy [BR:br08610]
KEGG organisms in taxonomic ranks [BR:br08611]
Data source
GenBank (Assembly: GCA_000715175.2 Complete Genome)
BioProject: 246557
Comment
Isolated from activated sludge of a wastewater treatment facility of a herbicide manufacturer.
Degrades the chloroacetanilide herbicides alachlor, acetochlor, and butachlor via N-dealkylation.
Chromosome
Circular
  Sequence
GB:CP021181
  Length
5921052
Plasmid
pDC01; Circular
  Sequence
GB:CP021182
  Length
199964
Plasmid
pDC02; Circular
  Sequence
GB:CP021183
  Length
117506
Plasmid
pDC03; Circular
  Sequence
GB:CP021184
  Length
115498
Plasmid
pDC04; Circular
  Sequence
GB:CP021185
  Length
95350
Plasmid
pDC05; Circular
  Sequence
GB:CP021186
  Length
35564
Plasmid
pDC06; Circular
  Sequence
GB:CP021187
  Length
25502
Plasmid
pDC07; Circular
  Sequence
GB:CP021188
  Length
24123
Plasmid
pDC08; Circular
  Sequence
GB:CP021189
  Length
17574
Plasmid
pDC09; Circular
  Sequence
GB:CP021190
  Length
9585
Plasmid
pDC10; Circular
  Sequence
GB:CP021191
  Length
6108
Plasmid
pDC11; Circular
  Sequence
GB:CP021192
  Length
5526
Statistics
Number of nucleotides:       6573352
Number of protein genes:        5999
Number of RNA genes:              58
Created
2017
Reference
PMID:24928877
  Authors
Chen Q, Wang CH, Deng SK, Wu YD, Li Y, Yao L, Jiang JD, Yan X, He J, Li SP
  Title
Novel three-component Rieske non-heme iron oxygenase system catalyzing the N-dealkylation of chloroacetanilide herbicides in sphingomonads DC-6 and DC-2.
  Journal
Appl Environ Microbiol 80:5078-85 (2014)
DOI:10.1128/AEM.00659-14
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