GENOME: Salvelinus namaycush (lake trout)
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Entry
T07522 Complete Genome
Org code
snh
Name
Salvelinus namaycush (lake trout)
Annotation
yes
Show organism
Taxonomy
TAX:
8040
Lineage
Eukaryota; Opisthokonta; Metazoa; Eumetazoa; Bilateria; Deuterostomia; Chordata; Craniata; Vertebrata; Gnathostomata; Teleostomi; Euteleostomi; Actinopterygii; Actinopteri; Neopterygii; Teleostei; Osteoglossocephalai; Clupeocephala; Euteleosteomorpha; Protacanthopterygii; Salmoniformes; Salmonidae; Salmoninae; Salvelinus
Taxonomy
Genome browser
Brite
KEGG organisms [BR:
br08601
]
KEGG organisms in the NCBI taxonomy [BR:
br08610
]
KEGG organisms in taxonomic ranks [BR:
br08611
]
KEGG organisms: animals [BR:
br08612
]
BRITE hierarchy
Data source
RefSeq
(Assembly:
GCF_016432855.1
Chromosome)
BioProject:
690826
Chromosome
1 (RS:
NC_052307
)
2 (RS:
NC_052308
)
3 (RS:
NC_052309
)
4 (RS:
NC_052310
)
5 (RS:
NC_052311
)
6 (RS:
NC_052312
)
7 (RS:
NC_052313
)
8 (RS:
NC_052314
)
9 (RS:
NC_052315
)
10 (RS:
NC_052316
)
11 (RS:
NC_052317
)
12 (RS:
NC_052318
)
13 (RS:
NC_052319
)
14 (RS:
NC_052320
)
15 (RS:
NC_052321
)
16 (RS:
NC_052322
)
17 (RS:
NC_052323
)
18 (RS:
NC_052324
)
19 (RS:
NC_052325
)
20 (RS:
NC_052326
)
21 (RS:
NC_052327
)
22 (RS:
NC_052328
)
23 (RS:
NC_052329
)
24 (RS:
NC_052330
)
25 (RS:
NC_052331
)
26 (RS:
NC_052332
)
27 (RS:
NC_052333
)
28 (RS:
NC_052334
)
29 (RS:
NC_052335
)
30 (RS:
NC_052336
)
31 (RS:
NC_052337
)
32 (RS:
NC_052338
)
33 (RS:
NC_052339
)
34 (RS:
NC_052340
)
35 (RS:
NC_052341
)
36 (RS:
NC_052342
)
37 (RS:
NC_052343
)
38 (RS:
NC_052344
)
39 (RS:
NC_052345
)
40 (RS:
NC_052346
)
41 (RS:
NC_052347
)
42 (RS:
NC_052348
)
MT; Circular (RS:
NC_036392
)
Statistics
Number of protein genes: 39192
Number of RNA genes: 2462
Created
2021
Reference
PMID:
34351050
Authors
Smith SR, Normandeau E, Djambazian H, Nawarathna PM, Berube P, Muir AM, Ragoussis J, Penney CM, Scribner KT, Luikart G, et al.
Title
A chromosome-anchored genome assembly for Lake Trout (Salvelinus namaycush).
Journal
Mol Ecol Resour 22:679-694 (2022)
DOI:
10.1111/1755-0998.13483
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