KEGG   GENOME: Coffea arabica (coffee)
Entry
T11342            Complete  Genome                                 
Org code
carb
Name
Coffea arabica (coffee)
Annotation
yes
Taxonomy
TAX:13443
  Lineage
Eukaryota; Viridiplantae; Streptophyta; Magnoliopsida; Gentianales; Rubiaceae; Coffea; Coffea arabica
Org group
Plants; Eudicots; Gentianales
Brite
KEGG organisms [BR:br08601]
KEGG organisms in the NCBI taxonomy [BR:br08610]
KEGG organisms in taxonomic ranks [BR:br08611]
KEGG organisms: plants [BR:br08613]
Data source
RefSeq (Assembly: GCF_036785885.1 Chromosome)
Keywords
Photosynthesis
Chromosome
1c (RS:NC_092310)
1e (RS:NC_092311)
2c (RS:NC_092312)
2e (RS:NC_092313)
3c (RS:NC_092314)
3e (RS:NC_092315)
4c (RS:NC_092316)
4e (RS:NC_092317)
5e (RS:NC_092318)
5c (RS:NC_092319)
6c (RS:NC_092320)
6e (RS:NC_092321)
7c (RS:NC_092322)
7e (RS:NC_092323)
8e (RS:NC_092324)
8c (RS:NC_092325)
9c (RS:NC_092326)
9e (RS:NC_092327)
10e (RS:NC_092328)
10c (RS:NC_092329)
11c (RS:NC_092330)
11e (RS:NC_092331)
Pltd; Circular (RS:NC_008535)
Statistics
Number of protein genes:       50280
Number of RNA genes:           17333
Created
2025
Reference
PMID:38622339
  Authors
Salojarvi J, Rambani A, Yu Z, Guyot R, Strickler S, Lepelley M, Wang C, Rajaraman S, Rastas P, Zheng C, et al.
  Title
The genome and population genomics of allopolyploid Coffea arabica reveal the diversification history of modern coffee cultivars.
  Journal
Nat Genet 56:721-731 (2024)
DOI:10.1038/s41588-024-01695-w
Reference
PMID:17309688
  Authors
Samson N, Bausher MG, Lee SB, Jansen RK, Daniell H
  Title
The complete nucleotide sequence of the coffee (Coffea arabica L.) chloroplast genome: organization and implications for biotechnology and phylogenetic  relationships amongst angiosperms.
  Journal
Plant Biotechnol J 5:339-53 (2007)
DOI:10.1111/j.1467-7652.2007.00245.x
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