KEGG   GENOME: Clupea harengus (Atlantic herring)
Entry
T09045            Complete  Genome                                 
Org code
char
Name
Clupea harengus (Atlantic herring)
Annotation
yes
Taxonomy
TAX:7950
  Lineage
Eukaryota; Opisthokonta; Metazoa; Eumetazoa; Bilateria; Deuterostomia; Chordata; Craniata; Vertebrata; Gnathostomata; Teleostomi; Euteleostomi; Actinopterygii; Actinopteri; Neopterygii; Teleostei; Osteoglossocephalai; Clupeocephala; Otomorpha; Clupei; Clupeiformes; Clupeoidei; Clupeidae; Clupeinae; Clupea
Brite
KEGG organisms [BR:br08601]
KEGG organisms in the NCBI taxonomy [BR:br08610]
KEGG organisms in taxonomic ranks [BR:br08611]
KEGG organisms: animals [BR:br08612]
Data source
RefSeq (Assembly: GCF_900700415.2 Chromosome)
BioProject: 587748
Chromosome
1 (RS:NC_045152)
2 (RS:NC_045153)
3 (RS:NC_045154)
4 (RS:NC_045155)
5 (RS:NC_045156)
6 (RS:NC_045157)
7 (RS:NC_045158)
8 (RS:NC_045159)
9 (RS:NC_045160)
10 (RS:NC_045161)
11 (RS:NC_045162)
12 (RS:NC_045163)
13 (RS:NC_045164)
14 (RS:NC_045165)
15 (RS:NC_045166)
16 (RS:NC_045167)
17 (RS:NC_045168)
18 (RS:NC_045169)
19 (RS:NC_045170)
20 (RS:NC_045171)
21 (RS:NC_045172)
22 (RS:NC_045173)
23 (RS:NC_045174)
24 (RS:NC_045175)
25 (RS:NC_045176)
26 (RS:NC_045177)
MT; Circular (RS:NC_009577)
Statistics
Number of protein genes:       26665
Number of RNA genes:             748
Created
2023
Reference
  Authors
Pettersson ME, Rochus CM, Han F, Chen J, Hill J, Wallerman O, Fan G, Hong X, Xu Q, Zhang H, et al.
  Title
A chromosome-level assembly of the Atlantic herring genome-detection of a supergene and other signals of selection.
  Journal
Genome Res 29:1919-1928 (2019)
DOI:10.1101/gr.253435.119
Reference
  Authors
Lavoue S, Miya M, Saitoh K, Ishiguro NB, Nishida M
  Title
Phylogenetic relationships among anchovies, sardines, herrings and their relatives (Clupeiformes), inferred from whole mitogenome sequences.
  Journal
Mol Phylogenet Evol 43:1096-105 (2007)
DOI:10.1016/j.ympev.2006.09.018
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