KEGG   GENOME: Nicotiana tabacum (common tobacco)
Entry
T04643            Complete  Genome                                 
Org code
nta
Name
Nicotiana tabacum (common tobacco)
Category
Reference genome
Annotation
yes
Taxonomy
TAX:4097
  Lineage
Eukaryota; Viridiplantae; Streptophyta; Magnoliopsida; Solanales; Solanaceae; Nicotiana; Nicotiana tabacum
Org group
Plants; Eudicots; Solanales
Brite
KEGG organisms [BR:br08601]
KEGG organisms in the NCBI taxonomy [BR:br08610]
KEGG organisms in taxonomic ranks [BR:br08611]
KEGG organisms: plants [BR:br08613]
Data source
RefSeq (Assembly: GCF_000715075.1 Chromosome)
BioProject: 1284271
Keywords
Photosynthesis
Chromosome
1 (RS:NC_134080)
2 (RS:NC_134081)
3 (RS:NC_134082)
4 (RS:NC_134083)
5 (RS:NC_134084)
6 (RS:NC_134085)
7 (RS:NC_134086)
8 (RS:NC_134087)
9 (RS:NC_134088)
10 (RS:NC_134089)
11 (RS:NC_134090)
12 (RS:NC_134091)
13 (RS:NC_134092)
14 (RS:NC_134093)
15 (RS:NC_134094)
16 (RS:NC_134095)
17 (RS:NC_134096)
18 (RS:NC_134097)
19 (RS:NC_134098)
20 (RS:NC_134099)
21 (RS:NC_134100)
22 (RS:NC_134101)
23 (RS:NC_134102)
24 (RS:NC_134103)
MT; Circular (RS:NC_006581)
Pltd; Circular (RS:NC_001879)
Statistics
Number of protein genes:       60381
Number of RNA genes:            5535
Created
2017
Reference
PMID:38278835
  Authors
Sierro N, Auberson M, Dulize R, Ivanov NV
  Title
Chromosome-level genome assemblies of Nicotiana tabacum, Nicotiana sylvestris, and Nicotiana tomentosiformis.
  Journal
Sci Data 11:135 (2024)
DOI:10.1038/s41597-024-02965-2
Reference
PMID:24807620
  Authors
Sierro N, Battey JN, Ouadi S, Bakaher N, Bovet L, Willig A, Goepfert S, Peitsch MC, Ivanov NV
  Title
The tobacco genome sequence and its comparison with those of tomato and potato.
  Journal
Nat Commun 5:3833 (2014)
DOI:10.1038/ncomms4833
Reference
PMID:16453699
  Authors
Shinozaki K, Ohme M, Tanaka M, Wakasugi T, Hayashida N, Matsubayashi T, Zaita N, Chunwongse J, Obokata J, Yamaguchi-Shinozaki K, et al.
  Title
The complete nucleotide sequence of the tobacco chloroplast genome: its gene organization and expression.
  Journal
EMBO J 5:2043-2049 (1986)
DOI:10.1002/j.1460-2075.1986.tb04464.x
Reference
PMID:15583938
  Authors
Sugiyama Y, Watase Y, Nagase M, Makita N, Yagura S, Hirai A, Sugiura M
  Title
The complete nucleotide sequence and multipartite organization of the tobacco mitochondrial genome: comparative analysis of mitochondrial genomes in higher plants.
  Journal
Mol Genet Genomics 272:603-15 (2005)
DOI:10.1007/s00438-004-1075-8
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