Glutamicibacter nicotianae: QQS42_04180
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Entry
QQS42_04180 CDS
T09135
Name
(GenBank) AMP-dependent synthetase/ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
gnc
Glutamicibacter nicotianae
Pathway
gnc00061
Fatty acid biosynthesis
gnc00071
Fatty acid degradation
gnc01100
Metabolic pathways
gnc01212
Fatty acid metabolism
gnc02024
Quorum sensing
gnc04146
Peroxisome
Module
gnc_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
gnc00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
QQS42_04180
00071 Fatty acid degradation
QQS42_04180
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
QQS42_04180
09145 Cellular community - prokaryotes
02024 Quorum sensing
QQS42_04180
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
gnc01004
]
QQS42_04180
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
gnc04147
]
QQS42_04180
Enzymes [BR:
gnc01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
QQS42_04180
Lipid biosynthesis proteins [BR:
gnc01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
QQS42_04180
Exosome [BR:
gnc04147
]
Exosomal proteins
Exosomal proteins of breast milk
QQS42_04180
Exosomal proteins of breast cancer cells
QQS42_04180
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
WIV44812
LinkDB
All DBs
Position
complement(869619..871460)
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AA seq
613 aa
AA seq
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MQEVTVELLTDLAPEVNTTNLLLDRVARGAQRPLFSVQRDGTWHDLSAGDFLIDVKRLAM
VLINDGLQPGDKVAIISRTRYEWALAEEAVWFAGGVSVPIYETSSAFQVEWILRDSGARV
VFAENHELRATVRQAAAQLGEPVRTHIFEGSDADDTTLIPSAGLHQLMVPADQIDEQLIE
SRRASMALKDVATMVYTSGTTGRPKGCNMTHSNFAMVAHNLAGNMLEVLGEERRTLMFLP
LAHVLARAVQQTCIHGGSVIAHSSSMANLVEDMSAVKPGFLLAVPRVFEKIRTSALATAE
RGGKADLFLKAEQAAIEVSKIRDARSRGLKARMPLGLRARHAIFSKVLYPKLQAVFGGQC
GYAISGASALNPDLAHFFRGAGIQLLEGYGLTETTAPATVNQASRNRVGTVGRPIPGTSI
KIADDGEILVKGIGVFASYHNNPVATAEVFDEDGYFKTGDTGVLDDGGFLQVTGRKKELI
VTAGGKNVSPGPLEEMVRAGRIVAQCVLAGEQRPFITAMMTLDPEELAVWAKAKGLGAMT
LAEAAVDPAVIAEVQGYVDTANLTVSKAESIRKFVVLEEEFTEASGHLTNSLKLKRQSVL
EEFEDRVEALYRK
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atgcaagaagtgaccgtcgagctgctgactgatctggcaccagaggtcaacacgacgaac
ctgctccttgatcgcgtagcacgcggcgcacaacgcccgctgttcagcgtgcagcgagac
ggcacctggcatgatctcagcgccggtgatttcctcattgacgtcaagcgcctggcaatg
gtgctgatcaatgatggattgcagcccggcgacaaggtcgccattatttcccgcacccgc
tacgagtgggccttggccgaggaagccgtgtggttcgccggcggcgtgtcggtgccaatc
tacgaaacctccagcgccttccaggtcgaatggatcctgcgcgactccggtgcgcgcgtg
gtgttcgccgaaaaccatgagctgcgcgctaccgtccgccaggcggcagctcagctcggc
gaaccggtgcgcacccatatcttcgagggctccgacgcggacgatacgacgctcatcccc
tccgccggtctgcaccagctgatggttccggccgatcagatcgacgagcagctgatcgag
tcacgccgcgcatccatggccctcaaggatgtggccacgatggtctacacctcgggcact
accggacgccccaagggttgcaatatgacccattcgaacttcgccatggtggcgcacaac
ctggccggaaacatgctcgaagtgctcggtgaagaacgccggacgctgatgttccttccg
ctggcccacgtattggctcgtgccgtccagcaaacctgcatccacggcggatcggtgatt
gcgcactccagctcgatggccaacctggtcgaggacatgtccgcggtcaagcccggcttc
ctgctggccgtgccgcgcgtcttcgagaagatccgcaccagcgccctggccacagctgaa
cgcggcggcaaggctgacctcttcctcaaagccgagcaggcggccatcgaggtctccaag
atccgtgatgcgcggtcacgtggcctcaaggcgcgcatgccgttgggcttgcgtgcccgc
catgccatcttcagcaaggtgctctacccgaagctgcaggcagttttcggcggccagtgc
ggttacgcgatctccggagccagtgcgctgaatccggatctggcgcacttcttccgcggc
gccggcatccagctgctggagggctacggcctgaccgaaaccaccgcaccggccacggtg
aatcaggcatcgcgaaaccgcgtgggcaccgtgggccgtccgattcccggcacctccatc
aagatcgcggatgacggtgaaatcctggtcaaggggatcggagttttcgccagctaccac
aacaaccctgtagccacggccgaggttttcgacgaagacggctatttcaagaccggcgat
accggtgtcctggatgatggcggattcctgcaggtgaccggtcgcaagaaggaactgatc
gtcaccgccgggggcaagaatgtctcgccaggcccgctggaagagatggtccgcgccgga
cgcatcgtggcccagtgcgtgctggccggcgaacagcgcccattcatcacggccatgatg
acgctcgatcccgaagagttggcagtgtgggccaaggccaagggccttggggcaatgacc
ctggctgaggcggcagttgatcctgcggtgatcgccgaggtccaaggctacgtggatacc
gccaacttgaccgtttccaaggccgagtccattcgcaagttcgtggtgctggaagaggaa
ttcaccgaagcttcggggcacctgacgaactcgctgaagctcaagcgccagagcgttctc
gaggaattcgaagaccgggtggaagccctctaccgcaaatga
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