Glutamicibacter nicotianae: QQS42_06275
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Entry
QQS42_06275 CDS
T09135
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
gnc
Glutamicibacter nicotianae
Pathway
gnc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gnc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
QQS42_06275 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gnc03021
]
QQS42_06275 (rho)
03019 Messenger RNA biogenesis [BR:
gnc03019
]
QQS42_06275 (rho)
Transcription machinery [BR:
gnc03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
QQS42_06275 (rho)
Messenger RNA biogenesis [BR:
gnc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
QQS42_06275 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATP-synt_ab
Rho_RNA_bind
Rho_N
AAA_25
Spore_III_AA
NACHT
Motif
Other DBs
NCBI-ProteinID:
WIV45201
LinkDB
All DBs
Position
1320022..1322211
Genome browser
AA seq
729 aa
AA seq
DB search
MTETTSLTEGVDTKTSENKSAGLASLKMTQLQQLASQLGITGGSRMRKADLVKAIGDHQR
GGSVAAKDAKAAQEAKSAKAEAPAAKGEAAAEPAKETKARARRAPKAAAKEQAETETAAP
ETAAAAEAPAEKPARARRTSRRVTDSGKVAAAAETKEAAAEAPAEKQAPAEEAKAPRQRR
NSRSSKPAEQPAEQGTEPAEAPAENAENNGEAREERRERGNRRERGNRRERNNERNDAAE
SENAEERTDRREERRERSNDRNDRNERNDRNNRRERNNDRNDRNNDSNDSENTEERSERS
ERNDRRERRERNNDRNDRNNRRERNNDRNDRNNRNRRNRRDDDEPQLSEDDVVLPIAGIL
DVLENYAFVRTSGYLPGPNDVYVTLGQVKKYNLRKGDAIVGAIRQPREGETPNPRQKFNA
LVQLTSVNGKKPEDNKERVEFNKLVPLYPTERLRLETDPKLVGPRVIDLVAPIGKGQRGL
IVSPPKAGKTLILQSIANAITTNNPEVHLMMVLVDERPEEVTDMQRTVKGEVIASTFDRP
ADDHTTVAELAIERAKRLVEMGMDVVVLLDSMTRLGRAYNLAAPASGRILSGGVDSAALY
PPKRFFGAARNIENGGSLTILATALVETGSKMDEVIFEEFKGTGNMELRLSRQLAEKRIF
PAVDVNASSTRREEQLMSAEEVRIMWRLRRMLSGIDPQQALEVLTGKIRETQSNAEFLML
VNKTTPNKD
NT seq
2190 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgaaaccacgagcctcaccgaaggcgtggacaccaagacttccgaaaataagagt
gccggtctggcctctttgaagatgacccagctgcagcagttggcttcccagctgggaatt
accggcgggtcgcgcatgcgcaaggctgatctggtcaaggccatcggcgaccaccagcgc
ggtggctccgttgccgccaaggacgccaaggcagcgcaggaagccaagtcggccaaggcc
gaagcacctgcagccaagggcgaagccgccgccgagccggccaaggaaaccaaggcccgc
gcacgccgcgccccgaaggccgcagccaaggagcaggccgagaccgagaccgccgcaccg
gaaaccgcggcagctgccgaagcaccggcggaaaagcctgctcgcgcacgccgcacctcg
cgccgcgtgaccgactccggcaaggttgccgctgctgccgaaaccaaggaagcagccgcc
gaagcacctgccgagaagcaggccccagcagaggaagccaaggccccgcgccagcgccgc
aactcgcgcagcagcaagccagctgagcagcctgcagagcagggcaccgagccagccgag
gcaccggcagagaacgccgagaacaacggcgaagcacgcgaagagcgccgcgagcgcggc
aaccgccgtgagcgtggcaaccgccgcgagcgcaacaacgagcgcaatgacgccgccgag
tcggagaacgccgaagagcgcaccgaccgccgcgaagagcgccgagagcgcagcaacgat
cgcaacgatcgcaacgagcgcaatgaccggaacaaccgccgtgagcgcaacaacgatcgc
aatgatcgcaacaacgactcgaacgactcggagaacaccgaggagcgttcggaacgcagc
gagcgcaatgaccgccgtgaacgccgcgagcgcaacaatgaccgcaatgaccggaacaac
cgccgtgagcgcaacaacgaccgcaacgaccggaacaaccgcaaccgccgcaaccgccgt
gatgacgacgagccgcagctgagcgaagacgatgtcgtgctgccgatcgccggcatcctg
gacgtgctggagaactacgcgttcgtccgcacctccggctacctgcccggcccgaacgac
gtctacgtcaccctgggccaggtcaagaagtacaacctgcgcaagggcgacgccatcgtc
ggcgccatccgccagccgcgcgagggcgagaccccgaacccgcgccagaagttcaacgcc
ctggtgcagctgacctccgtcaacggcaagaagccggaagacaacaaggaacgcgtcgag
ttcaacaagctcgtgccgctgtacccgaccgagcgcctgcgcctggaaaccgacccgaag
ctggtcggcccgcgcgtcatcgacctggttgccccgatcggcaagggccagcgcggcctg
atcgtctcgcctccaaaggccggcaagacgctgatcctgcagtccatcgcgaacgccatc
acgaccaacaacccagaggtgcacctgatgatggtgctggtcgacgagcgtcccgaagaa
gtcaccgacatgcagcgcacggtcaagggcgaggtcatcgcctcgaccttcgaccgcccg
gcagatgaccacaccaccgtggccgagctggccatcgagcgcgccaagcgcctggtggaa
atgggcatggatgtcgtggtcctgctggactcgatgacccgcctgggccgcgcctacaac
ctggccgcccctgcctcgggccgcatcctctccggcggcgtggactcggcggcgctgtac
ccgccgaagcgcttcttcggtgccgcccgcaacatcgagaacggcggctcgctgaccatc
ctggccaccgccctggtggagaccggatccaagatggacgaggtcatcttcgaggaattc
aagggcaccggcaacatggagcttcgcctctcgcgccagctggccgagaagcgcattttc
cctgcggtggatgtcaacgcatcctcgacccgccgcgaagagcagctgatgagtgccgaa
gaggtgcgcatcatgtggcgcctgcgccgcatgctctcgggcatcgatccgcagcaggca
ctggaggtgctcaccgggaagatccgcgagacccagtccaacgcggaattcctgatgctg
gtcaacaagaccactccaaacaaggattag
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