Glutamicibacter nicotianae: QQS42_10625
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Entry
QQS42_10625 CDS
T09135
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
gnc
Glutamicibacter nicotianae
Pathway
gnc03030
DNA replication
gnc03430
Mismatch repair
gnc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
gnc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
QQS42_10625 (dnaE)
03430 Mismatch repair
QQS42_10625 (dnaE)
03440 Homologous recombination
QQS42_10625 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gnc03032
]
QQS42_10625 (dnaE)
03400 DNA repair and recombination proteins [BR:
gnc03400
]
QQS42_10625 (dnaE)
Enzymes [BR:
gnc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
QQS42_10625 (dnaE)
DNA replication proteins [BR:
gnc03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
QQS42_10625 (dnaE)
DNA repair and recombination proteins [BR:
gnc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
QQS42_10625 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DNA_pol_IIIA_C
OB_MCM10
Motif
Other DBs
NCBI-ProteinID:
WIV45701
LinkDB
All DBs
Position
complement(2235932..2239441)
Genome browser
AA seq
1169 aa
AA seq
DB search
MLDGAARLGELFAEANRQGMEAMAITDHGYLFGAFDFWRQATGAGVKPIIGVEAYVTPGT
ARDDKTRVKWRTDESQKGDDVSGGGLYNHMTLLSYNNKGMDNLFKGSSRASLDSVFGKYP
RWDRELLNDHHEGIIATTGCPSGEVQTKLRLGQYDAAKAAAAELQDLFGKENYYCEIMDH
GLEIERRITKDLLRLAKELDIPLVATNDLHYTHESDAKAHEALLAINSGSTLDEPTYDQG
GSRFAFSGTGYYLKSAREMRELFKELPQACDNTLEIADRVEVSFDTNANYMPKFPCPPGE
DETSWLIKEVDKGLHYRYPNGIPDESRKQADYELDVIIKMGFPGYFLVVADFINWSKDHG
IRVGPGRGSGAGSMVAYAMRITDLDPLRHGLIFERFLNPERVSMPDFDVDFDDRRRSEVI
KYVTEKYGDERVSMIVTYGSIKTKQALKDSSRVLGYPFSMGESLTKALPPAVMAKDIPLN
DIDNPESKRYSEAGDFRNLVANDPEAARVFETAKGLEGLKRQWGVHAAGVIMSSDPIINV
IPIMRRIQDGQVITQFDYPTCEGLGLIKMDFLGLRNLTIISDALENIEYNTGKKIDLETL
TIEDPEAYKLLARGDTLGVFQLDGGPMRSLLKMMRPDNFEDISAVIALYRPGPMGANSHT
NYALRKTGLQEVTPIHPELAEPLEEILGGTYGLIVYQEQVMAIAQKLAGYSLGQADILRR
AMGKKKKAELDKQFAGFKQGMNDNGYSDQAVQTLWDILLPFSDYAFNKAHSAAYGVVSYW
TAYLKAHYPAEYMAALLTSVGDDKDKLALYLNECRHIGITVLPPDVNESALNFTPVGKDI
RFGMGAIRNVGTNAVAGMVEARTEKGHYNDFNDFLGKVPAVVCNKRTIESLIKAGAFDSM
KHPRRALVAIHEEAVDSVIQVKRNEAANQFDLFSALGAEESSESMHVAIPDIPDWDKKEK
LAYERDMLGLYVSDHPLQGLGSALEQYADMPVTHVLSDDGPQDGHIISIAGMISGLQRRI
AKKSGNPYARCEIEDLSGSMEVMFFGQAYQPIAEILADDLIVVVKGRVQRRDDGSITLNA
QEMMIPEISEDANGGPVVIGIPTHKATETLVQKLGDVLRTHSGNTEVRVKLTGSRGTSLM
RLGMNFRVNPNPALFGDLKVLLGPHCLDV
NT seq
3510 nt
NT seq
+upstream
nt +downstream
nt
atgctggatggtgcggcgcggcttggcgaactcttcgctgaagccaaccggcagggcatg
gaagccatggcgattaccgaccatggatatctgttcggtgccttcgatttctggcgccag
gccaccggcgccggcgtcaagccgatcatcggtgtcgaagcctatgtcacccccggtacc
gcacgcgatgacaagacccgcgtgaaatggcgtaccgacgaatcgcaaaagggcgatgac
gtctccggtggcggcctctacaaccacatgaccttgctctcgtacaacaacaagggcatg
gacaacctcttcaagggttcttcccgcgcctcgctggactccgttttcggcaaatatccc
cgctgggaccgcgagctgctcaacgaccaccacgaaggcataatcgccaccaccggctgc
ccatcgggtgaagtgcagaccaagctccgcctgggccagtacgacgctgccaaggccgcc
gcggcagaactgcaggatctgttcggcaaggaaaactactactgcgagatcatggaccac
ggtctggagatcgaacgccgcatcaccaaggacttgctgcgcctggccaaggaactggac
attccgctggtggccaccaacgacctgcactacacccacgaatccgatgccaaggcccac
gaagcgctgctggccatcaactccggatccacgctcgacgagcccacctacgaccagggt
ggcagccgcttcgccttctccggcaccggctactacctgaagtcggcgcgcgagatgcgc
gagctgttcaaggaattgccgcaagcctgcgacaacaccctggagatcgcagaccgtgtt
gaagtctccttcgacaccaacgccaactacatgccgaagttcccctgcccgccgggggag
gacgagaccagctggctgatcaaggaggtcgacaaggggctgcactaccgctacccgaac
ggcatcccggacgagtcgcgcaagcaagcggactacgagctggacgtcatcatcaagatg
ggcttcccgggatatttcctggtggtggccgacttcatcaactggtccaaggaccacggc
atccgcgtaggcccgggacgcggttccggtgcaggttccatggtcgcctacgccatgcgc
atcaccgacctcgacccgctgaggcacggcctgatcttcgagcgcttcctgaacccggaa
cgtgtttccatgcccgacttcgacgtcgacttcgatgatcgccgtcgttccgaggtcatc
aagtacgtgaccgaaaagtacggcgatgagcgcgtatcgatgatcgtgacctacggctcg
atcaagaccaagcaggcgctgaaggactcctcgcgcgtgctcggctacccattcagcatg
ggcgaatcccttaccaaggcgctgccgccggcggtgatggccaaggacatcccgctcaac
gacatcgacaatccggaatccaagcgctactccgaagccggcgatttccgcaacctggtg
gcaaatgacccggaggcggcacgcgtcttcgagaccgccaagggcctggaagggctgaag
cgccagtggggcgtgcacgccgccggcgtgatcatgagttcggacccgatcatcaacgtc
atcccgatcatgcgccgtatccaggatggccaggtcatcacccagttcgactacccgacc
tgcgaaggcctggggctgatcaagatggacttcctggggttgcgcaacctcaccattatt
tccgatgcgctggagaacatcgagtacaacaccggcaagaaaatcgatctcgaaaccctg
accatcgaggaccccgaggcctacaagctgctggcccgtggagataccctgggcgtgttc
cagctcgatggcggcccgatgcgttcgctgctgaagatgatgcgcccggataacttcgag
gacatttccgcagtgatcgcgctgtatcgtccgggccccatgggcgccaactcgcacacc
aactatgcgctgcgcaagaccgggttgcaggaagtcaccccaatccacccggagctggcc
gagccgctggaagaaatcctcggcggcacctacggcctgatcgtgtaccaggagcaggtt
atggctattgcgcagaagctggccggctactcgctgggccaggcagacatcctgcgccgc
gccatgggcaagaagaagaaagccgagctggacaagcagttcgccggcttcaagcagggc
atgaacgacaacggctactccgatcaggccgtgcagaccctgtgggacatcctgctgccc
ttctccgattatgccttcaacaaagcccactcggcggcctacggcgtcgtctcctactgg
accgcctacctcaaggcgcactacccggctgaatacatggctgcgctgctgacctcggtg
ggcgacgacaaggacaagctggcgctgtacctgaacgaatgccgccacatcggcatcacc
gtgctgccgccggatgtcaacgaatcggcattgaacttcaccccagtgggcaaggacatc
cgcttcggcatgggcgcgatccgcaacgtcggaaccaacgcggtggccggcatggtcgaa
gcccgcacggagaagggccactacaacgacttcaacgatttcctgggcaaggtcccggcc
gtggtctgcaacaagcggaccattgaatcgctgatcaaggccggcgccttcgactccatg
aagcatccgcgccgggcgctggtggccatccacgaagaagccgtggattcggtgatccag
gtcaagcgcaacgaggccgccaaccagttcgacctgttcagtgccctgggtgccgaggaa
tcctccgagtccatgcatgtggcgatccccgacattcccgactgggacaagaaggaaaag
ctggcctacgagcgcgacatgctcggcctgtacgtctccgaccacccgctgcagggcctg
ggctccgccctggagcagtacgccgatatgccggtcacgcacgtgctctcggacgacggt
ccgcaggacggccacatcatttcgatcgccggcatgatttccggcctgcagcgccgcatc
gccaagaagagcggcaacccgtatgcccgctgcgagatcgaggacctctcaggctcaatg
gaagtcatgttcttcggccaggcctaccagccgatcgccgagatcctggccgatgacctg
atcgtagtggtcaagggacgcgtgcagcgccgcgatgacggttcgatcaccctgaacgcg
caggaaatgatgatcccggaaatttccgaggacgccaacgggggaccggtagtcatcggc
attccaacccacaaggccaccgaaaccctggtgcagaaactcggcgatgtgctgcgcacg
cacagcggcaacaccgaggtgcgggtcaagctcaccggaagccgcggcacctcgctgatg
cgcctgggcatgaacttccgggtcaacccgaaccccgcgctgttcggcgatttgaaggtc
ctgctcggcccgcactgcctggacgtgtag
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