Glutamicibacter nicotianae: QQS42_10965
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Entry
QQS42_10965 CDS
T09135
Name
(GenBank) ATP-dependent DNA helicase UvrD2
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
gnc
Glutamicibacter nicotianae
Pathway
gnc03420
Nucleotide excision repair
gnc03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
gnc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
QQS42_10965
03430 Mismatch repair
QQS42_10965
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gnc03400
]
QQS42_10965
Enzymes [BR:
gnc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
QQS42_10965
DNA repair and recombination proteins [BR:
gnc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
QQS42_10965
MMR (mismatch excision repair)
Other MMR factors
QQS42_10965
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
HRDC
UvrD_C_2
AAA_12
Viral_helicase1
AAA_30
HHH
zf-C2H2_12
C1_1
DUF6889
Zn_ribbon_RPB9
PHDvar_NSD
Motif
Other DBs
NCBI-ProteinID:
WIV42835
LinkDB
All DBs
Position
complement(2317656..2319779)
Genome browser
AA seq
707 aa
AA seq
DB search
MTEYDNPPATDLLAGLDAEQRQAAETLSGPLCILAGAGTGKTRAITHRIAYGVHTGIYNP
TSVLALTFTTRAAAEMRTRLRQLGAPGVQTRTFHAAALRQLQYFWPQAIGGTLPNLVEHK
APLIAEAARRLRISSDRAMVRDLAAEIEWAKVSMHTPESYAKIAASRELPNGLESVSMAR
IFQTYEELKDDRGVIDFEDVLLLTIAILEDNEKVAASVRQQYRHFVVDEYQDVSPLQQRL
LDLWLGQRNELCVVGDASQTIYSFTGARPDYLLNFSARFPEAKVVKLVRDYRSTPEVVNL
ANKVLANRRIESQVPDRHVTWPEPLELIAQRDHGPAPEFFEATDDENEAVEVAQRIKQLL
KNGQDISEIAILYRTNGQSQAFEQALTGHSIPYVMRGAERFFSRREVKEGMLALRAGLSV
AADAPVAQMVRDILSSHGYSVNAPSGGTGAVRQRWESMSALVRLADEVVAFKKEQDIDAT
LHDVVKELEDRAAIQHAPTLDGVTLASFHAAKGLEWDAVFLVGLNEGLVPISYAKDQAGF
DEERRLLYVGITRARKHLYLSWSLARTPGGRAHRYPSRFLDGIKSVRQASSRQQTSYRKR
EQKITPAVCMTCGSFLTSAKERKLKRCASCPAAYDEALFEDLREWRSEVAQSNAVPAFVI
FTDATLMSIAEHQPDSIQGLSKIPGVGRSKLERYGEAVLAVVGERRA
NT seq
2124 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgaatacgacaatccgccagcaaccgatttgctagcgggactggatgctgaacag
cggcaagcagctgaaaccctcagcggtccactgtgtattctggcaggcgcaggaaccgga
aagaccagggccattacccaccggattgcctacggcgtgcataccggcatctacaacccg
accagcgttctggctctgaccttcaccactcgtgctgccgcggaaatgcgcacccgcttg
cgtcagctcggcgcccccggcgtgcagacgcgaacgttccacgcggcggcgttgcgccag
ctgcagtacttctggccgcaggccattggcggaaccctgccgaacctggttgagcataag
gccccgttgatcgcagaagcagcgcgtcgcctgcgcatttccagcgaccgtgccatggtc
cgtgatcttgctgccgaaatcgagtgggccaaggtgtccatgcacacacctgagagctat
gccaagatcgcagcatcccgcgaactgcccaacggtcttgaatcagtcagcatggctcga
atcttccagacctacgaagagcttaaagatgaccgcggtgtgatcgacttcgaggatgtg
ctgctgctgaccattgcgattctggaagacaacgaaaaagtcgcagccagtgtacgccag
cagtaccgccactttgtcgtggacgagtaccaggacgtgtcgccgctgcagcagcggctc
ctggatctctggctcggacaacgcaacgagctgtgcgtggtgggcgatgcctcccagacc
atttactcgtttaccggtgcgcgccctgactacttgctgaacttcagtgcacgcttcccg
gaggcgaaagtcgtgaagctggtccgcgattaccgttccacacctgaagtggtcaatttg
gctaacaaggtgctggctaaccggcgcattgaatcccaggtcccagaccgccatgtcacc
tggccagaaccgctggaactcatcgcgcaacgcgaccacggtccagcccccgaattcttt
gaagcgactgacgacgaaaacgaagccgttgaagtcgcacagcggatcaagcagctgctc
aaaaacggccaggacatttccgaaattgccatcctgtaccgcaccaacggacagtcccag
gcctttgagcaggctctgacgggacattccattccctatgtgatgcgtggcgcagaacga
ttcttctcccgccgcgaggtgaaggaaggcatgctcgcgctgcgggccggcttgagtgtt
gccgcggatgctccggtcgcgcagatggtacgcgatatcctttcctcgcatggctactcg
gtgaacgctccgagtggcggcaccggtgcagtgcgccagcgttgggagtcgatgtcggca
ctggttcgcctggccgatgaagtcgttgctttcaagaaagaacaggacatcgatgccacg
ctgcacgatgtggtcaaggagctcgaagaccgcgcggcgatccagcacgcgccgacgcta
gatggcgtcactttggcgtccttccatgcggctaaggggttggagtgggacgccgtattt
cttgtcgggttgaacgaaggcttggtcccgatttcctatgccaaggatcaagcgggcttc
gacgaagaacggcgcttgctgtacgtgggcattacccgtgcacggaagcacctgtacctg
tcctggtcgcttgccaggacgccgggtggacgtgcgcaccgttacccatcgcgattcttg
gatgggattaaatcagtacgccaagccagcagcaggcagcagaccagctatcgcaagcgt
gaacagaaaatcacgccagccgtctgcatgacctgcggctcgttcttgaccagtgcgaag
gagcggaagctcaagcgttgcgcctcatgcccggctgcttatgatgaggcactgttcgag
gacttgcgtgaatggcgatcggaagttgcccagtccaatgcggtccccgctttcgtcatc
ttcaccgatgcaaccctcatgtctatcgcggagcaccagccggattcaatccagggattg
tcgaagattccaggagtgggtcgcagcaagcttgaacgatatggcgaggcggtattggcg
gtcgttggcgagcgccgcgcctag
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