Glutamicibacter nicotianae: QQS42_12585
Help
Entry
QQS42_12585 CDS
T09135
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
gnc
Glutamicibacter nicotianae
Brite
KEGG Orthology (KO) [BR:
gnc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gnc03032
]
QQS42_12585 (topA)
03400 DNA repair and recombination proteins [BR:
gnc03400
]
QQS42_12585 (topA)
Enzymes [BR:
gnc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
QQS42_12585 (topA)
DNA replication proteins [BR:
gnc03032
]
Prokaryotic type
DNA Topoisomerases
QQS42_12585 (topA)
DNA repair and recombination proteins [BR:
gnc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
QQS42_12585 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Toprim_4
HC2
Motif
Other DBs
NCBI-ProteinID:
WIV43138
LinkDB
All DBs
Position
complement(2630557..2633346)
Genome browser
AA seq
929 aa
AA seq
DB search
MPPKAKEKTGKKLVIVESPAKVKSIAKYLGEGFDVDASVGHIRDLPQPSELPTELKKTSV
GKFAVDLDNDFEPYYMVYPDKKKRVSELKAKLKEADELYLATDADREGEAIAWHLLQVLK
PKVPVRRLAFTEITKEGIARALENMRELDTDLVDAQETRRVLDRLYGYEISPVLWRKVAR
GLSAGRVQSVATRLVVERERERMAFIPAGYWDVKGNFATSDGEAFAAKLSAVDGARVASG
RDFDDRGQLKATRNKLAHLDQESAQSLVANLSKTDFEVTSVEDKPYTRRPAAPFTTSTLQ
QEASRKLRWSSKITMQIAQRLYENGYITYMRTDSVFLSGEAVTAARKQATELYGADSVPA
KPRVYKAKNDAAQEAHEAIRPAGDMFRRPKDVRSSLSKDEYTLYELIWKRTVASQMADAK
GFTATIKLQGTASDQRVAEFSASGTVITFRGFLSAYEEGKDEQAVEAAAENAEARLPQLA
VGQQLAGDELTALGHETTPPARYTEASIVAELEKREIGRPSTYAPTISTIMDRGYVTKRG
GALVPSWIAFSVIRLLEEHFAKYVDYDFTARLEDDLDEIANGQRARTDWLNLFYFGKGAD
AETEGLKHVVDNLGDIDARAINSIKVTDDITLRVGKFGPYLERAIPEGAEEGTEPQRANV
PEDLAPDELTAEKAEELFANSQVSEKDLGNDPETGRKIVAKDGRYGAYVTEIIPEPTAEE
LAALPVEYYKNGKPKPPKKPTKVKPRTASLFKSMTVESVTLEEALKLMSLPRVLGADAEG
EEITVQNGRFGPYLKKGSDSRSIESEEQIFTITLDEALAIYAQPKQRGRRAAVPPLAEFG
VDPTSEKNIVVKDGRFGPYITDGVTNITVPRGTSLEELTREQAIELLADKRARGPVKRTA
KKAPAKKPAAKKAPAKKATAKKTTAKKTD
NT seq
2790 nt
NT seq
+upstream
nt +downstream
nt
gtgccccccaaggccaaggaaaagactggtaagaaactcgtaatcgtggagtctcctgcc
aaggtgaagtcgatcgccaagtatttgggcgaaggctttgacgtggatgcctctgtgggc
catatccgcgaccttccgcagccctcggaactgccaaccgagctgaagaaaacctccgta
ggcaagttcgctgtcgatctggacaacgacttcgaaccgtactacatggtctacccggac
aagaagaagcgcgtttccgaactgaaggcgaagctcaaggaagctgacgaactttacctc
gcaaccgatgcggaccgcgagggcgaagccatcgcgtggcacctgctgcaggtcctgaag
ccaaaggttccggtacgccgcctggcctttaccgaaatcaccaaggaaggcatcgcccgc
gccctggagaacatgcgcgaactggataccgacctcgtcgacgcccaggaaacccgccgt
gtcctggaccgcctctacggttacgaaatttcaccggtgctttggcgcaaggtggcccgc
ggcctgtcagcaggccgtgtgcagtccgtggcaacccgtctggtcgttgagcgcgaacgc
gaacgcatggccttcatccccgccggatactgggacgtgaagggcaacttcgctaccagt
gacggcgaagcttttgcggcaaagctgtcggcagtggacggcgcccgtgtcgcctccggc
cgcgacttcgatgaccgcggccagttgaaggccacccgcaacaagctggctcaccttgac
caggaatcggcccagtcgctggtggcgaacctgtcgaagaccgacttcgaggtgacctct
gtcgaggacaagccgtacacccgtcgtccggcagcgccgttcaccacctccacgctgcag
caggaagcatcccgcaagctgcgctggagttcaaagatcaccatgcagatcgcccagcgc
ctgtatgaaaacggctacatcacctatatgcgtaccgactcggtcttcctctcgggcgag
gcagtgactgccgcgcgcaagcaggccaccgaactgtacggagccgattccgttccagcc
aaaccacgcgtctacaaggcgaagaatgatgcggcccaggaagcccacgaagcgatccga
ccggcaggtgacatgttccgccgcccgaaggacgttcgctcctcgctgtccaaggacgaa
tacacgctctacgagctgatctggaagcgcaccgtcgcctcgcagatggccgatgccaag
ggcttcaccgccaccatcaagctgcagggcaccgccagcgatcagcgggtggcagagttc
tcggcatccggcaccgtcatcaccttccgcggtttcctttccgcctatgaggagggcaag
gacgagcaggctgtagaagccgcggcagagaatgccgaagcgcgcctgccgcagctggcc
gtgggccagcagctggctggcgacgagctgaccgcactaggccacgaaaccaccccgcca
gcccgctacaccgaagcttccatcgtggctgagcttgaaaagcgcgagatcggccgcccg
tcgacctacgcgccaaccatctcgaccatcatggaccgcggctacgtcaccaagcgcggc
ggcgccctggtgccgagctggatcgcgttctcggtgatccgcctgctcgaagagcacttc
gcgaagtacgtggactacgatttcaccgcccggctggaagacgatctcgatgagatcgcc
aacggccagcgtgcccgcaccgactggctgaacctgttctacttcggcaagggcgcggat
gccgagaccgagggcctgaagcatgtggtcgacaacctgggcgatatcgacgcccgggcg
atcaactcgatcaaggtcaccgacgacatcaccttgcgtgtgggcaagttcggcccgtat
ctggaacgtgccatcccggaaggtgccgaggaagggaccgagccgcagcgcgccaacgtg
cctgaggacctggccccggatgagctgactgccgaaaaagccgaggagctcttcgccaat
tcgcaggtctcggaaaaggacctgggcaatgatccggaaaccggtcgcaagatcgtggcc
aaggatggccgctacggcgcctacgtcaccgagatcattccggaaccgaccgcggaggaa
ttggcggcgctgccggtcgagtactacaagaatggcaagcccaagccgccgaagaagcca
accaaggtcaagccgcgcaccgcgtcgctgttcaagtccatgaccgtggaatcggtgacc
ttggaagaggcactgaagctgatgagcctgccacgtgtgctgggggctgatgccgaaggc
gaagagatcacggtgcagaacggccgcttcggcccgtacctgaagaagggcagcgattcg
cgctccatcgagagcgaagagcagatcttcacgatcacgctggacgaggcgctggcgatc
tacgcgcagccgaagcaacgcggccggcgtgccgcggtgccgccattggccgagttcggc
gtcgacccgaccagcgagaagaacatcgtggtcaaggacggccgcttcggcccgtacatc
accgacggcgtcacgaacatcaccgtgccgcgcggcacctcgctggaggagctgacccgc
gagcaggctatcgaactgcttgcggacaagcgtgcccgcggaccagtgaagcgcacggca
aagaaggcgccggccaagaagccggcagccaagaaggccccggcgaagaaggcaacggcc
aagaagaccaccgcaaaaaagactgactag
DBGET
integrated database retrieval system
