Glutamicibacter nicotianae: QQS42_14495
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Entry
QQS42_14495 CDS
T09135
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
gnc
Glutamicibacter nicotianae
Brite
KEGG Orthology (KO) [BR:
gnc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gnc03032
]
QQS42_14495
03400 DNA repair and recombination proteins [BR:
gnc03400
]
QQS42_14495
Enzymes [BR:
gnc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
QQS42_14495
DNA replication proteins [BR:
gnc03032
]
Prokaryotic type
DNA Topoisomerases
QQS42_14495
DNA repair and recombination proteins [BR:
gnc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
QQS42_14495
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
WIV43504
LinkDB
All DBs
Position
3051065..3052255
Genome browser
AA seq
396 aa
AA seq
DB search
MLRPLARFQGGSGAINPLQAPGPPAGDAHPAREGWDFPANARFRERIGGSVSVIPRLLNQ
QEAAMAARRTSRLPITRRRAGTGFFYLEGSRSVKDPRLLERIRKLSIPPAWQQVQIAASS
RAKVQARGIDAAGRTQMIYHPEFRDRQDAAKFDRLPAFGRALPNLRRQLMRDLRRGSSDK
NKVTAAVIMLLDLHLLRIGTHAYSHSNESFGAASLRSKHLAVQGHCATLDFPGKSGQEQH
VKIRSRRLVKVLAELRDQPGYEIFRYLDEEGKSRLLQPSQINQYLAEHLDGEFTAKDFRT
WGGSLAAFEALLEAPASAMAAEDATNLRKLAVEQAARILGNTPEIAAGSYIDPRVLALAE
DPGKLSSLRRSKSQLKTKNHLDPASRCMLRFLERTG
NT seq
1191 nt
NT seq
+upstream
nt +downstream
nt
ttgttgcggccactggcgcgattccagggcggttcaggcgcaatcaacccgctgcaggcc
cccggtccacccgccggtgatgcgcatccggcgcgggagggctgggattttcctgcgaac
gcccggttccgtgaaaggatcggcggtagtgtgtccgtgattccacggctactaaaccaa
caggaggctgccatggcggcacggcgaacctcgcggcttcccatcacgcgccgacgcgca
ggaaccggcttcttctatctggaaggctcgcgctccgttaaggacccgcgcctgctggag
cggatcaggaaattgtcgattccgccggcttggcaacaggtccagatcgcggccagttcg
cgggccaaggtccaagctcgcggaatagatgcggcaggacgcacccagatgatttatcac
ccggaattccgtgatcgccaggatgccgccaaattcgaccggttgccagcgttcggccgt
gcgctgccgaatctccgccgtcagctgatgcgggatttgcgccggggaagcagcgacaag
aacaaggtcactgcggccgtgataatgctgctggatcttcacctgctgcgcatcggcacg
catgcatactcgcattccaacgaatccttcggggctgcttcgttgcgatccaagcatctg
gcggtccaagggcattgcgccaccctcgattttcctggcaagagcggccaggagcagcat
gtgaaaatcaggagccggcgactggtaaaagtgctggctgaattgcgcgatcaaccgggc
tatgagattttccgctatctggacgaagaagggaagtcacgcttgcttcagccatcacag
atcaaccagtacctcgccgagcatttggatggcgaattcacggccaaggacttcagaacc
tggggcggcagcttggcagcgttcgaggcattgcttgaggctcccgcctcagcgatggcg
gccgaagatgcaacgaatctgcgtaagctggccgtcgagcaagccgccagaatactgggc
aatactcccgaaatcgccgccggatcctatatcgacccgcgggtgctggcattggcggaa
gatcctgggaaattgtcgtcgctgcgccgttccaaaagccagctcaagaccaagaaccat
ttggatcctgcgtcgcgttgcatgctacgttttcttgaaaggaccgggtag
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