Brumicola nitratireducens: GNIT_0296
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Entry
GNIT_0296 CDS
T01632
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
gni
Brumicola nitratireducens
Pathway
gni03420
Nucleotide excision repair
gni03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
gni00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
GNIT_0296 (uvrD)
03430 Mismatch repair
GNIT_0296 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gni03400
]
GNIT_0296 (uvrD)
Enzymes [BR:
gni01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
GNIT_0296 (uvrD)
DNA repair and recombination proteins [BR:
gni03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
GNIT_0296 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
GNIT_0296 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
AAA_12
Viral_helicase1
SseB_C
VBS_C3G9
ArAE_1_C
Motif
Other DBs
NCBI-ProteinID:
AEP28450
UniProt:
G4QFA6
LinkDB
All DBs
Position
complement(334368..336539)
Genome browser
AA seq
723 aa
AA seq
DB search
MDVTRLLEDLNDKQREAVAAPAQDMLILAGAGSGKTRVLVHRIAWLMEVESVAPYSILAV
TFTNKAAREMRGRVERLMGQPMNTMWIGTFHGLAHRLLRSHYEEAGLPENFQILDSDDQY
RLIKRLLKSMNLDEKHWPPKQIQWYINGNKDEGLRSKHIETHGDHTQQKMKEIYAAYEQT
CQRSGLIDFAELLLRAHELWANNPKVLQHYQKRFRAVLVDEFQDTNNIQYAWLKLLACDN
NNMMIVGDDDQSIYGWRGANVQNISHFLRDYPTADTIKLEQNYRSTSNILNAANAVIGHN
PGRLGKELWTEDSEGEKIALYAGFNDLDEARFIISQIKTYYEQGAALSDCAILYRNNAQS
RVLEEALLHEGLAYRIYGGLRFFERQEIKDALAYLRLINQPIDDAAFERVVNTPTRGMGD
KTLSNLRVFARENDISMWQASSKMLAQNMLSGRAANALKSFVEMILQMTQDVKDLPLEKK
ADHAIKHSGLYAMYQAEKGEKAKARVENLEELVTACKQYEAPEEAEEMSPLSAFLAHASL
EAGDAQADANQDAVQMMTIHSAKGLEFPFVTLAGVEEGMFPSQMSNDEPGKLEEERRLCY
VGMTRAMQKLLITYAETRRLYGQDKYHTPSRFIREIPGDFIEEIRLRTQIKQPVHNRFSG
ATSHAAFQDSGFKLGERVEHKKFGEGTVLNYEGSGEHARVHVNFDTVGTKILMLAYAKLT
KMG
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atggacgtaactcgactactcgaagatcttaacgacaagcaacgtgaagctgttgcagcg
cccgcgcaagacatgttgatattagctggtgcaggcagcggtaaaaccagagtattggtg
catcgcattgcttggttaatggaagtggagtcagttgcgccttacagtattttagccgtg
acctttaccaataaagccgcgcgtgaaatgcgtggtcgtgttgaacgtttaatgggccaa
cccatgaacactatgtggattggcaccttccatggcttagctcatcgtctattgcgttcg
cattacgaagaagccggtttacctgaaaatttccaaatactcgattcggacgatcagtac
cgtttaatcaaacgtttattaaagtcgatgaacttagacgaaaagcactggccaccaaaa
caaattcagtggtacataaacggtaataaagacgaaggtttgcgttcaaagcatattgaa
acccacggcgaccacactcagcaaaaaatgaaggaaatttatgctgcttatgagcaaact
tgccaacgctcaggcctgattgattttgcagaactactgttaagagcccacgaactttgg
gctaacaatcctaaggttttacaacattatcaaaagcgcttccgagcggttcttgtagac
gaatttcaagacacaaacaacattcaatatgcatggttaaaactgcttgcatgtgacaac
aacaacatgatgattgtgggtgatgacgaccagtctatctatggctggcgcggcgcgaac
gttcagaatatctcgcacttcttgcgcgattatcctacagcagacactatcaaacttgag
cagaactaccgttcgacctccaacattctaaacgctgctaacgcggtgattggccataac
cctggccgcttaggcaaagaattatggaccgaagatagtgagggcgaaaaaattgcgcta
tacgctgggtttaacgatttagacgaagcccgcttcattatttcgcaaattaaaacctac
tacgaacaaggtgctgcgcttagcgattgcgccatcctatatcgcaacaacgcgcaatct
cgagttctggaagaagcgttactacatgaaggtttagcctaccgaatttatggcggctta
cgcttcttcgaacgccaagaaattaaggatgcactcgcttatttgcgcttaattaatcag
ccaattgatgatgccgcgtttgaacgcgtagtcaacacgccaacccgcggcatgggtgac
aaaacactttcaaacttacgcgtatttgcacgagaaaacgatatttcgatgtggcaggcc
agcagtaaaatgcttgcacaaaacatgctttcagggcgcgcagcaaatgcacttaaaagt
tttgtagagatgatcctacaaatgacccaagacgtgaaagatttgcctctcgagaaaaag
gccgatcacgctattaagcattctggtttatacgccatgtatcaggctgaaaaaggcgaa
aaagccaaagctcgagtagaaaacttagaagaattagtgactgcctgtaagcaatatgaa
gcgcccgaggaagccgaagaaatgagtccactatctgcatttttagcacatgcatcacta
gaagcaggtgacgctcaagcggatgcgaatcaggatgcagtgcaaatgatgactatccac
agtgcaaaaggtctcgagtttccatttgttacactggccggcgtcgaagaaggcatgttc
ccaagtcagatgagcaatgacgagccaggtaaattagaagaagagcgtcgcctttgttac
gttggtatgacacgcgccatgcaaaagctgctgatcacctatgctgaaactcggcgctta
tacggccaagataaatatcacacaccatcgcgctttattcgcgaaatacccggtgacttt
atcgaagaaattaggcttcgaacgcaaataaaacagcctgttcacaatcgcttcagcggc
gctacctcgcatgctgcgtttcaagacagtggatttaagttaggtgagcgcgttgaacat
aagaagtttggcgaaggcactgtgctgaattacgaaggttcgggcgaacatgcgcgtgtt
cacgtgaactttgatacggtaggcactaaaattctaatgctggcctatgccaaattaacc
aagatgggataa
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