Brumicola nitratireducens: GNIT_0307
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Entry
GNIT_0307 CDS
T01632
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
gni
Brumicola nitratireducens
Pathway
gni00300
Lysine biosynthesis
gni00470
D-Amino acid metabolism
gni01100
Metabolic pathways
gni01110
Biosynthesis of secondary metabolites
gni01120
Microbial metabolism in diverse environments
gni01230
Biosynthesis of amino acids
Module
gni_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
gni00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
GNIT_0307 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
GNIT_0307 (dapF)
Enzymes [BR:
gni01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
GNIT_0307 (dapF)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DAP_epimerase
PhzC-PhzF
YNQ4_N
CntK_N
Motif
Other DBs
NCBI-ProteinID:
AEP28461
UniProt:
G4QFB7
LinkDB
All DBs
Position
complement(353615..354445)
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AA seq
276 aa
AA seq
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MLLNFSKMHGLGNDFVVIDNVTQNVFFSKEKIQQLADRHFGIGFDQMLIVEPPYDPDQDF
HYRIYNADGSEVSQCGNGARCFAKFVKQKGLINRNKIIVSTKAGRMVLYLEKDGSVTVNM
GRPVFAPERIPFKANKQENFYIIRDNEHTFFCGVVSMGNPHCVLEVDDVDTHDVVGIGKI
IGNNERFPEGVNVGFMQIISRSEIKLRVFERGSGETLACGSGACAAVAIGIMQDKLDKEV
NVTLPGGKLIIKWQGEDSLLKMTGPAEHIYDGQITL
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atgctgttaaatttttctaaaatgcacgggctcggcaacgactttgtcgttattgataac
gttacccaaaatgtgtttttctccaaagagaagatccagcagcttgccgaccgccatttt
ggcatcggcttcgatcagatgctgattgtagaaccgccttacgacccagaccaagatttt
cattaccgaatttacaatgctgacggcagcgaagtttctcaatgtggcaatggggctcgc
tgctttgctaaatttgttaaacaaaaaggcttgataaaccgcaacaagataattgttagc
acaaaagccggtcgcatggtgctgtatctcgaaaaagacggcagcgtaacggtgaatatg
gggcgtcccgtatttgcgccagagcgcattccattcaaagcaaataaacaagaaaacttc
tacattatccgtgataatgaacacacttttttctgtggtgtagtgtcgatgggtaaccct
cattgcgtcctcgaagttgatgacgtagacactcacgatgttgtgggtattggcaaaata
attggcaataatgaacgcttcccagaaggcgtaaatgttggtttcatgcaaataataagt
cgtagcgagataaagcttcgggtttttgaacgcggcagcggagagactctcgcctgcggc
agcggggcttgcgcagcggttgcgatcggtattatgcaagacaagctagataaagaagtg
aatgtcacgcttcctggtggtaaactaattataaaatggcaaggggaagacagtctatta
aaaatgacgggccccgcagaacacatttatgacggacaaataacgctatga
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