Brumicola nitratireducens: GNIT_0308
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Entry
GNIT_0308 CDS
T01632
Symbol
lysA
Name
(GenBank) putative diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
gni
Brumicola nitratireducens
Pathway
gni00300
Lysine biosynthesis
gni00470
D-Amino acid metabolism
gni01100
Metabolic pathways
gni01110
Biosynthesis of secondary metabolites
gni01120
Microbial metabolism in diverse environments
gni01230
Biosynthesis of amino acids
Module
gni_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
gni00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
GNIT_0308 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
GNIT_0308 (lysA)
Enzymes [BR:
gni01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
GNIT_0308 (lysA)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
DUF1955
Motif
Other DBs
NCBI-ProteinID:
AEP28462
UniProt:
G4QFB8
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All DBs
Position
complement(354492..355742)
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AA seq
416 aa
AA seq
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MDFFTYKDAQLFAEDVAVADIAKAHGTPVYIYSRATIERHWHAFNNAVAKHDHLICYAVK
ANSNLGVLSVLAKLGSGFDIVSKGELCRVIEAGGDPTKVVFSGVGKTSDEIRFALQQNIM
CFNVESDAELDRINKVAGEIDVKAPISIRINPDVDAKTHPYISTGLKANKFGIARDDALR
VYKRAAAMPHLDVKGMDCHIGSQLTDITPFVDALERLLILIDELAEHDIHISHLDVGGGL
GVPYNDETPPHPNEYAAAMAAKMHGREHLKLILEPGRAIAANAGILVTEVEFLKQGEEKN
FAIVDAAMNDLIRPALYSAWQAIIPVQPRLDIAAQKYDVVGPVCETGDFLGKDRDLAIVP
GDYLAVRSAGAYGFVMASNYNSRCRPPEIMIDKTETIVVREREKLKDLWKGEHKIT
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atggatttctttacctataaagatgcgcaactttttgcggaagacgtcgcagttgctgat
attgcaaaggcacatggcacgcctgtatacatttattcgagagcaactattgaacgtcat
tggcatgctttcaataatgctgttgctaaacacgatcatcttatttgctacgcagtaaaa
gctaactctaacctgggtgtattgtcagttttagctaagttaggttcaggctttgacatc
gtcagtaaaggcgagctatgccgtgtcattgaagccggcggcgatccaacaaaagtggtt
ttttctggtgtcggtaaaacatcggatgaaatacgttttgcgctgcaacaaaacatcatg
tgttttaatgttgaatccgacgcagagcttgaccgaattaataaagtagcgggtgaaata
gatgttaaagcgcctatttcaatccgcattaatccggatgttgatgcaaaaacgcaccct
tatatttcaacagggttgaaagccaataaattcggtatcgctcgcgatgatgcgctgcgt
gtttacaaacgcgctgctgcaatgcctcatttagacgttaaaggaatggactgtcacatt
ggttctcagttgaccgatatcacaccgtttgttgatgcattagagcggttattaatatta
atagacgagctggctgagcacgatatccacatttcacatcttgacgttggcggcggttta
ggcgttccttataacgacgagacgcctcctcatccgaatgaatatgcagcggctatggct
gcaaaaatgcacggccgcgagcatctcaaacttattttggagcccggcagagcgattgct
gcaaatgcaggtatcttagttaccgaagttgagtttttaaaacaaggtgaagagaaaaac
ttcgcgatcgtcgatgctgcgatgaacgatttaatacgccctgcattatacagtgcatgg
caggccatcattccagttcaaccacgactggatattgcggcgcaaaagtatgatgttgtc
ggtcctgtttgtgaaaccggcgattttttaggtaaagatcgcgacttggcaatcgtgcca
ggggattatcttgcagtcagaagcgctggtgcttatggcttcgtgatggctagcaactat
aatagtcgttgtaggcctcctgagattatgatcgataaaacagagaccattgtggttcgc
gagagagaaaaattaaaagatctctggaaaggcgagcataaaattacgtaa
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