Brumicola nitratireducens: GNIT_0659
Help
Entry
GNIT_0659 CDS
T01632
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase alpha subunit
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
gni
Brumicola nitratireducens
Pathway
gni03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
gni00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
GNIT_0659 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gni03021
]
GNIT_0659 (rpoA)
03400 DNA repair and recombination proteins [BR:
gni03400
]
GNIT_0659 (rpoA)
Enzymes [BR:
gni01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
GNIT_0659 (rpoA)
Transcription machinery [BR:
gni03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
GNIT_0659 (rpoA)
DNA repair and recombination proteins [BR:
gni03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
GNIT_0659 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
Motif
Other DBs
NCBI-ProteinID:
AEP28812
UniProt:
G4QFM7
LinkDB
All DBs
Position
732123..733109
Genome browser
AA seq
328 aa
AA seq
DB search
MGSVTEFLKPRLVEIENISPTRAKVTLEPLERGFGHTLGNALRRILLSSMPGCAVTEVEI
DGVLHEYSTKEGVQEDVIEILLNLKGLAVRLEGKTEATLTLVKSGAGLVVAGDIQHDGDV
EIVNPEHVICTLTGEAELSMRIKVEMGRGYVPASTRRSSEDDDRPIGRLLVDASYSPVER
IAYSVESARVEQRTDLDKLIIDMETNGTLDPEEAIRRSATILAEQLDAFVELRDISEPVE
KEEKPEFDPILLRPVDDLELTVRSANCLKAEAIQYIGDLVQRTEVELLKTPNLGKKSLTE
IKDVLASRGLSLGMRLENWPPESIAEKD
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
gtgggttcagtgaccgaattcctaaagccaagattagttgaaattgaaaatatttcacct
actcgtgcaaaagtaacactagagcctttagagcgaggcttcggccatactctaggtaat
gcgcttcgtcgtattttgctttcgtctatgccaggttgtgcagtgactgaagttgaaatt
gatggtgtattacatgagtacagcactaaagaaggtgttcaagaagacgtaattgaaatt
ttgcttaaccttaaaggactagcagttcgtcttgaaggtaaaaccgaggcaactcttaca
ctagttaaatctggtgcaggtttagttgttgccggtgatatccagcacgatggtgacgtt
gagatcgtaaatccagagcacgttatttgtactttaactggcgaagctgagttgagcatg
cgcatcaaagtagaaatgggccgaggttatgttccagcttcaactcgtcgttcctctgaa
gatgatgatcgtcctattggtcgtttattagttgatgcttcatacagccctgtagaacgt
attgcttattctgtagagtcagctcgtgttgaacaacgcactgacctagacaagctaatt
atcgatatggaaactaacggtactttagacccagaagaagcgattcgccgttctgctact
attttagctgagcaattagatgccttcgtagaattacgtgacatttctgagccggttgaa
aaagaagagaaaccagaattcgatccaattctacttcgtcctgttgacgacttagagtta
acggttcgttctgctaactgtttgaaagcggaagctatccaatatattggtgacctggta
cagcgtactgaagttgaacttcttaaaacgcctaacttaggtaagaagtcgcttacagaa
attaaagatgtacttgcttctcgtggtttgtcactaggcatgcgcctagaaaattggcca
ccagaatcaatcgctgaaaaagattaa
DBGET
integrated database retrieval system
